Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30715
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens ... 34 0.56
BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for IM... 33 1.3
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 33 1.3
AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alp... 33 1.3
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 33 1.3
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 33 1.3
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 32 1.7
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 32 1.7
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 32 1.7
BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein. 30 9.1
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 9.1
AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein. 30 9.1
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ... 30 9.1
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein. 30 9.1
AF176706-1|AAF17611.1| 192|Homo sapiens F-box protein FBX11 pro... 30 9.1
AF174599-1|AAF04520.1| 197|Homo sapiens F-box protein Fbx11 pro... 30 9.1
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 9.1
>AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ46197 fis, clone TESTI4007565. ).
Length = 140
Score = 33.9 bits (74), Expect = 0.56
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 295 CR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 426
CR S C P + P PG + P + PT RC+ P P
Sbjct: 10 CRLPSCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53
>BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for
IMAGE:5480483) protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.3
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +1
Query: 334 AHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQ 513
+ P+P R P + R+P +PR P PS R T+S + + R + S
Sbjct: 174 SRPVPARVSRPTEKPIQRNPGMPR---PPPPSTRPLPPTTSSSKKPIPTLARTEAKITSH 230
Query: 514 LTDPSPVKVYVPEPLPPLKRKFMFQSKCTCPLPLPQLGGKKSTFTPLKGFPVT 672
+ P+ + +P PP F + + P P P G +ST P P T
Sbjct: 231 ASKPASARTSTHKP-PP------FTALSSSPAPTP--GSTRSTRPPATMVPPT 274
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 32.7 bits (71), Expect = 1.3
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +1
Query: 334 AHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQ 513
+ P+P R P + R+P +PR P PS R T+S + + R + S
Sbjct: 411 SRPVPARVSRPAEKPIQRNPGMPR---PPPPSTRPLPPTTSSSKKPIPTLARTEAKITSH 467
Query: 514 LTDPSPVKVYVPEPLPPLKRKFMFQSKCTCPLPLPQLGGKKSTFTPLKGFPVT 672
+ P+ + +P PP F + + P P P G +ST P P T
Sbjct: 468 ASKPASARTSTHKP-PP------FTALSSSPAPTP--GSTRSTRPPATMVPPT 511
>AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 714
Score = 32.7 bits (71), Expect = 1.3
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +1
Query: 334 AHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQ 513
+ P+P R P + R+P +PR P PS R T+S + + R + S
Sbjct: 358 SRPVPARVSRPAEKPIQRNPGMPR---PPPPSTRPLPPTTSSSKKPIPTLARTEAKITSH 414
Query: 514 LTDPSPVKVYVPEPLPPLKRKFMFQSKCTCPLPLPQLGGKKSTFTPLKGFPVT 672
+ P+ + +P PP F + + P P P G +ST P P T
Sbjct: 415 ASKPASARTSTHKP-PP------FTALSSSPAPTP--GSTRSTRPPATMVPPT 458
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 32.7 bits (71), Expect = 1.3
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +1
Query: 334 AHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQ 513
+ P+P R P + R+P +PR P PS R T+S + + R + S
Sbjct: 411 SRPVPARVSRPAEKPIQRNPGMPR---PPPPSTRPLPPTTSSSKKPIPTLARTEAKITSH 467
Query: 514 LTDPSPVKVYVPEPLPPLKRKFMFQSKCTCPLPLPQLGGKKSTFTPLKGFPVT 672
+ P+ + +P PP F + + P P P G +ST P P T
Sbjct: 468 ASKPASARTSTHKP-PP------FTALSSSPAPTP--GSTRSTRPPATMVPPT 511
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 32.7 bits (71), Expect = 1.3
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +1
Query: 334 AHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQ 513
+ P+P R P + R+P +PR P PS R T+S + + R + S
Sbjct: 411 SRPVPARVSRPAEKPIQRNPGMPR---PPPPSTRPLPPTTSSSKKPIPTLARTEAKITSH 467
Query: 514 LTDPSPVKVYVPEPLPPLKRKFMFQSKCTCPLPLPQLGGKKSTFTPLKGFPVT 672
+ P+ + +P PP F + + P P P G +ST P P T
Sbjct: 468 ASKPASARTSTHKP-PP------FTALSSSPAPTP--GSTRSTRPPATMVPPT 511
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 340 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQLT 519
P P + P+ R RSP +P PLP+ + +G + A +R CL + T
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPA--APPIPPRRSCLPP--TCFT 130
Query: 520 DPSPVKVYVPEP-LPPLKRKFMFQSKCTCPLPLPQLG 627
PS P+P LPPL K P+P P+ G
Sbjct: 131 TPSTA---APDPVLPPLPAKRHLAELSVPPVP-PRTG 163
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 340 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQLT 519
P P + P+ R RSP +P PLP+ + +G + A +R CL + T
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPA--APPIPPRRSCLPP--TCFT 130
Query: 520 DPSPVKVYVPEP-LPPLKRKFMFQSKCTCPLPLPQLG 627
PS P+P LPPL K P+P P+ G
Sbjct: 131 TPSTA---APDPVLPPLPAKRHLAELSVPPVP-PRTG 163
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 340 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLTQSKRRCLTQYMSQLT 519
P P + P+ R RSP +P PLP+ + +G + A +R CL + T
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPA--APPIPPRRSCLPP--TCFT 165
Query: 520 DPSPVKVYVPEP-LPPLKRKFMFQSKCTCPLPLPQLG 627
PS P+P LPPL K P+P P+ G
Sbjct: 166 TPSTA---APDPVLPPLPAKRHLAELSVPPVP-PRTG 198
>BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein.
Length = 915
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/94 (25%), Positives = 34/94 (36%)
Frame = +1
Query: 280 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSR 459
PQ RN E +P G P + R LP+ CP + + TS+
Sbjct: 56 PQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSMEGASTST- 114
Query: 460 TATLTQSKRRCLTQYMSQLTDPSPVKVYVPEPLP 561
T +R SQ +P + Y+ E LP
Sbjct: 115 TENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLP 148
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 340 PLPGR--KENPLPRESARSPTLPRCQTCPLP 426
P PGR +E+P P++ P+ P Q PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356
>AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein.
Length = 927
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/94 (25%), Positives = 34/94 (36%)
Frame = +1
Query: 280 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSR 459
PQ RN E +P G P + R LP+ CP + + TS+
Sbjct: 68 PQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSMEGASTST- 126
Query: 460 TATLTQSKRRCLTQYMSQLTDPSPVKVYVPEPLP 561
T +R SQ +P + Y+ E LP
Sbjct: 127 TENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLP 160
>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
FLJ43332 fis, clone NT2RI3006340, highly similar to
Myomesin 1. ).
Length = 1685
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 322 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 438
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
Length = 1685
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 322 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 438
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AF176706-1|AAF17611.1| 192|Homo sapiens F-box protein FBX11
protein.
Length = 192
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/94 (25%), Positives = 34/94 (36%)
Frame = +1
Query: 280 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSR 459
PQ RN E +P G P + R LP+ CP + + TS+
Sbjct: 49 PQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSMEGASTST- 107
Query: 460 TATLTQSKRRCLTQYMSQLTDPSPVKVYVPEPLP 561
T +R SQ +P + Y+ E LP
Sbjct: 108 TENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLP 141
>AF174599-1|AAF04520.1| 197|Homo sapiens F-box protein Fbx11
protein.
Length = 197
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/94 (25%), Positives = 34/94 (36%)
Frame = +1
Query: 280 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSR 459
PQ RN E +P G P + R LP+ CP + + TS+
Sbjct: 53 PQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSMEGASTST- 111
Query: 460 TATLTQSKRRCLTQYMSQLTDPSPVKVYVPEPLP 561
T +R SQ +P + Y+ E LP
Sbjct: 112 TENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLP 145
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 340 PLPGR--KENPLPRESARSPTLPRCQTCPLP 426
P PGR +E+P P++ P+ P Q PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,732,343
Number of Sequences: 237096
Number of extensions: 1825269
Number of successful extensions: 5628
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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