Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30715
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   8.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.5  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   8.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 380 LSRGRGFSFLPGRGCAFRRGREQELS*RQLRFCGPPRARH 261
           L +G G  +LP  GC  + G + ++  ++   C   + +H
Sbjct: 233 LCKGDGKWYLPSGGCHCKPGYQADVEKQECTECPIGKFKH 272


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 641 VLFFPPNWGKGSGHVHFDWNMNFLFNG 561
           V+ FPP  G      H  +NM F  NG
Sbjct: 195 VICFPPLVGWKDKRSHPAYNMTFAQNG 221


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 47  VYIPQPRPPHPR 58



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 75  VYIPQPRPPHPR 86



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 131 VYIPQPRPPHPR 142



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 187 VYIPQPRPPHPR 198



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 215 VYIPQPRPPHPR 226



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 243 VYIPQPRPPHPR 254



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 271 VYIPQPRPPHPR 282


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 48  VYIPQPRPPHPR 59



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 76  VYIPQPRPPHPR 87



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 104 VYIPQPRPPHPR 115



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 132 VYIPQPRPPHPR 143


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 104 VYIPQPRPPHPR 115



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 130 VYIPQPRPPHPR 141



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 156 VYIPQPRPPHPR 167


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 19  VYIPQPRPPHPR 30



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 47  VYIPQPRPPHPR 58



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 75  VYIPQPRPPHPR 86



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 103 VYIPQPRPPHPR 114



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 131 VYIPQPRPPHPR 142



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 159 VYIPQPRPPHPR 170



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 VYVPEPLPPLKR 573
           VY+P+P PP  R
Sbjct: 187 VYIPQPRPPHPR 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,863
Number of Sequences: 438
Number of extensions: 3718
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)