Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30713
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 94   FYSSYNFDSSLLKRFFTRCFDSQCYSESELN*R*AAAW 207
            F   +NFD   L   + +C+   C    + + +  AAW
Sbjct: 1506 FLEKWNFDGLDLDWEYPKCWQVDCKKGPDSDKQAFAAW 1543


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 97  YSSYNFDSSLLKRFFTRCFDSQCYSESEL 183
           Y  Y   S L   FFT    +QCY  +EL
Sbjct: 159 YKYYQILSHLSGIFFTVFNVAQCYLTTEL 187



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -1

Query: 485 FLYKIKLIFEEQEVF 441
           FL+ ++++F + E+F
Sbjct: 9   FLHSVRIVFVQSEIF 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,749
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)