Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30712
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p pro...    30   2.7  
AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-P...    30   2.7  
AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-P...    30   2.7  
AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p pro...    30   3.6  
AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA...    30   3.6  
BT024965-1|ABE01195.1|  231|Drosophila melanogaster IP15245p pro...    29   6.2  
AY060702-1|AAL28250.1|  159|Drosophila melanogaster GH14459p pro...    29   6.2  
AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,...    29   6.2  
AY070858-1|AAL48480.1|   94|Drosophila melanogaster GM10787p pro...    29   8.2  
AY069365-1|AAL39510.1|  431|Drosophila melanogaster LD06965p pro...    29   8.2  
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA...    29   8.2  
AE013599-2077|AAF58124.1|  431|Drosophila melanogaster CG8192-PA...    29   8.2  

>BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p
           protein.
          Length = 674

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +3

Query: 144 AMASDEEDSIPDVGVEEDSDELALDQEETRNLRPRAYRRLHTTLCPAASVQ--HLPWLNW 317
           A   +EED   DV  EE+ +++  ++EET+N+             P    Q      ++ 
Sbjct: 313 AEEEEEEDVDDDVEDEEEEEQVEEEEEETQNVEEPTTEAPQQQQQPVQQHQLAKSGQIHS 372

Query: 318 LGTNNGHN-SRSSKNTSYLPGSNSKFTS 398
             T+NGH+ + S  + S +P + SK  S
Sbjct: 373 KPTHNGHHRANSGGSISKIPIATSKLQS 400


>AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-PB,
           isoform B protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +3

Query: 144 AMASDEEDSIPDVGVEEDSDELALDQEETRNLRPRAYRRLHTTLCPAASVQ--HLPWLNW 317
           A   +EED   DV  EE+ +++  ++EET+N+             P    Q      ++ 
Sbjct: 313 AEEEEEEDVDDDVEDEEEEEQVEEEEEETQNVEEPTTEAPQQQQQPVQQHQLAKSGQIHS 372

Query: 318 LGTNNGHN-SRSSKNTSYLPGSNSKFTS 398
             T+NGH+ + S  + S +P + SK  S
Sbjct: 373 KPTHNGHHRANSGGSISKIPIATSKLQS 400


>AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-PA,
           isoform A protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +3

Query: 144 AMASDEEDSIPDVGVEEDSDELALDQEETRNLRPRAYRRLHTTLCPAASVQ--HLPWLNW 317
           A   +EED   DV  EE+ +++  ++EET+N+             P    Q      ++ 
Sbjct: 313 AEEEEEEDVDDDVEDEEEEEQVEEEEEETQNVEEPTTEAPQQQQQPVQQHQLAKSGQIHS 372

Query: 318 LGTNNGHN-SRSSKNTSYLPGSNSKFTS 398
             T+NGH+ + S  + S +P + SK  S
Sbjct: 373 KPTHNGHHRANSGGSISKIPIATSKLQS 400


>AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 246 ADEDSLFPPDPEPVHRCLPPLPRQVYCLLHPKP 148
           A+ ++ + P  EPV + LPP P Q Y  L P+P
Sbjct: 225 AEPETKYLPPSEPVEKYLPPKPEQKY--LPPQP 255


>AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 246 ADEDSLFPPDPEPVHRCLPPLPRQVYCLLHPKP 148
           A+ ++ + P  EPV + LPP P Q Y  L P+P
Sbjct: 225 AEPETKYLPPSEPVEKYLPPKPEQKY--LPPQP 255


>BT024965-1|ABE01195.1|  231|Drosophila melanogaster IP15245p
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 336 HNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 452
           H S SS ++S+L  S+SK  S +   PS+ S++   S+D
Sbjct: 157 HKSNSSSSSSHLKSSSSKHGSSS--SPSKSSKDKYNSRD 193


>AY060702-1|AAL28250.1|  159|Drosophila melanogaster GH14459p
           protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 327 NNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKDH 455
           N   NS  S N +    SNSK +SKN    S L ++  + + H
Sbjct: 80  NYSSNSNKSNNNNSNRNSNSKSSSKNSSSNSMLQQQQQQQQQH 122


>AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,
            isoform A protein.
          Length = 1122

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 336  HNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 452
            H S SS ++S+L  S+SK  S +   PS+ S++   S+D
Sbjct: 1048 HKSNSSSSSSHLKSSSSKHGSSS--SPSKSSKDKYNSRD 1084


>AY070858-1|AAL48480.1|   94|Drosophila melanogaster GM10787p
           protein.
          Length = 94

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 312 NWLGTNNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKDH 455
           N+  +N G N R+SK   +LP     F    + RPS  +    K   H
Sbjct: 11  NYSSSNTGRNCRNSKRYCHLPCQQLSFHQVKICRPSPQNEYENKPIKH 58


>AY069365-1|AAL39510.1|  431|Drosophila melanogaster LD06965p
           protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 606 TAKVFHYCQDSVQATSWDSCPE 671
           + +VFHYCQ+S Q  SW  CPE
Sbjct: 161 SCEVFHYCQES-QKHSW-ICPE 180


>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
            protein.
          Length = 1399

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 288  KPLGRALYAVGGKHADEDSLFPPDPEPVHRCLPPL 184
            K  GR   AVGG   D ++   P+PEP+   + PL
Sbjct: 1196 KKRGRPKKAVGGVQTDTEAEPEPEPEPMISSVAPL 1230


>AE013599-2077|AAF58124.1|  431|Drosophila melanogaster CG8192-PA
           protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 606 TAKVFHYCQDSVQATSWDSCPE 671
           + +VFHYCQ+S Q  SW  CPE
Sbjct: 161 SCEVFHYCQES-QKHSW-ICPE 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,061,559
Number of Sequences: 53049
Number of extensions: 648925
Number of successful extensions: 2977
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2960
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)