Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30712
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   5.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.7  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   8.7  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   8.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = +1

Query: 127 FCWSEWRWLRMKKTVYLTW-EWRKTAMNWL----WIRRKQGIFVRVLTADCIQRSAQR 285
           FC S+  W        +TW  W  + MN +    W R  +  FVR+L A C  R  +R
Sbjct: 360 FC-SQCIWQEKIVFAAVTWLGWINSGMNPVIYACWSRDFRRAFVRILCACCPGRVRRR 416


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 186 VEEDSDELALDQEETRNLRPRAYRRLHT 269
           +    DEL  D ++    R R Y  +HT
Sbjct: 296 INRQVDELNFDIQDLERWRDRIYEAIHT 323


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 665 PGTGFNISHQGWHLD 709
           PGTG N++ +G+ +D
Sbjct: 314 PGTGINVTLKGYCID 328


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 699 QPWWEMLKPVPGK 661
           +PWWE  +P+  K
Sbjct: 74  RPWWERYQPISYK 86


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = -1

Query: 201 RCLPPLPRQVYCLLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTDFC 46
           RC    PR+ +    P    L    +    +T+ P++ T+   V+N+    C
Sbjct: 298 RCFTGGPRKSHESQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTC 349


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 389 VYIEEPRAPVRAVQRKP 439
           VYI +PR P   ++R+P
Sbjct: 104 VYIPQPRPPHPRLRREP 120



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 389 VYIEEPRAPVRAVQRKP 439
           VYI +PR P   ++R+P
Sbjct: 130 VYIPQPRPPHPRLRREP 146


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 87  TEKLSVKNYNTDF 49
           T+ L +KNYN D+
Sbjct: 99  TKNLEIKNYNIDW 111


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 156 DEEDSIPDVGVEEDSDELALDQEETRNLRPRAYRRLHTT 272
           +E+D++  V +E+   E       + +LR R +   HT+
Sbjct: 190 EEQDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTS 228


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 237 LRPRAYRRLHTTLCPAASVQHLPWLNWLGT 326
           L P     LH  +C + ++ +L WL ++GT
Sbjct: 16  LFPEKIIGLHNNMCTSLNLSNLFWL-FVGT 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,030
Number of Sequences: 438
Number of extensions: 4106
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)