Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30710
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.25 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.25 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       26   0.33 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.33 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.33 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.58 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    25   0.58 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.58 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -1

Query: 207 LFAYVFRDNLFRTFTFKWMQMFHFSCFVWFWNFVFEIVILINGIRFGTIGFDLRMTL 37
           +FA +     ++ F  ++ QM+     ++F NF F +V+ +  +R+  +   LR  L
Sbjct: 135 IFANIMGLEFYKQFAIEYFQMY----VLFFVNFAFFVVVKMLLVRYRNLTKQLRFKL 187


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -1

Query: 207 LFAYVFRDNLFRTFTFKWMQMFHFSCFVWFWNFVFEIVILINGIRFGTIGFDLRMTL 37
           +FA +     ++ F  ++ QM+     ++F NF F +V+ +  +R+  +   LR  L
Sbjct: 135 IFANIMGLEFYKQFAIEYFQMY----VLFFVNFAFFVVVKMLLVRYRNLTKQLRFKL 187


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 192 RHKQKEQSKESENITRSRTRIVEIQEADVGIKYDVSDGSDV 314
           RHKQ++Q K+ +   ++ + I +     + +  D S GSD+
Sbjct: 84  RHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDL 124


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 192 RHKQKEQSKESENITRSRTRIVEIQEADVGIKYDVSDGSDV 314
           RHKQ++Q K+ +   ++ + I +     + +  D S GSD+
Sbjct: 235 RHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDL 275


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 192 RHKQKEQSKESENITRSRTRIVEIQEADVGIKYDVSDGSDV 314
           RHKQ++Q K+ +   ++ + I +     + +  D S GSD+
Sbjct: 294 RHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDL 334


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 347 INYPFLIDFDRYVTPITN 294
           IN P+L  FD  VTP+ N
Sbjct: 62  INQPYLNHFDNSVTPMVN 79


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 347 INYPFLIDFDRYVTPITN 294
           IN P+L  FD  VTP+ N
Sbjct: 62  INQPYLNHFDNSVTPMVN 79


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 347 INYPFLIDFDRYVTPITN 294
           IN P+L  FD  VTP+ N
Sbjct: 62  INQPYLNHFDNSVTPMVN 79


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 248 SPRSSNVLRFFALFFLLMSSEIIFLELLPLNGCRCFTSV 132
           +P     L+ FAL     +     L L P+NG   FT V
Sbjct: 610 NPSLEEKLQIFALQLTHRAPTFTALGLFPINGSFAFTVV 648


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 507 PFYPLMHYGFRRN*LRVLQNYHRLQEKYFQ 418
           P   + H  +R    ++ Q YH+  EKY Q
Sbjct: 138 PDNAIEHSDYRAKLAQIRQIYHQELEKYEQ 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,474
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)