Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30705
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 142 2e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 4e-33
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 4e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 134 3e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 134 6e-32
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 109 1e-24
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 73 2e-13
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 73 2e-13
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 71 5e-13
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 70 1e-12
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 7e-12
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 1e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 55 3e-08
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 54 6e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 5e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 38 0.004
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.005
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.8
SB_59596| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_9059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.2
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 3.2
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 29 3.2
SB_31115| Best HMM Match : zf-CCCH (HMM E-Value=0.039) 28 5.6
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_14873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_78| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 142 bits (344), Expect = 2e-34
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 234
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 235 KYVPRAI 255
KYVPRA+
Sbjct: 271 KYVPRAV 277
Score = 136 bits (329), Expect = 1e-32
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 338 ESCDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 370
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 138 bits (333), Expect = 4e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 136 bits (329), Expect = 1e-32
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 125 ESCDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 4e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 7e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 338
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 134 bits (325), Expect = 3e-32
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PR++
Sbjct: 61 PRSV 64
Score = 134 bits (325), Expect = 3e-32
Identities = 67/94 (71%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 125 ESCDCIQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 134 bits (323), Expect = 6e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 435 ES 440
ES
Sbjct: 70 ES 71
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 109 bits (262), Expect = 1e-24
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 435 ES 440
E+
Sbjct: 81 EN 82
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 128 QC---TGLQGFLIFHSFGGGTGSGFSSLLMER 156
Score = 72.1 bits (169), Expect = 3e-13
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 561 QC---TGLQGFLIFHSFGGGTGSGFSSLLMER 589
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 232 GKYVPRAI 255
GK+VPRA+
Sbjct: 492 GKHVPRAV 499
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 713 QC---TGLQGFLIFHSFGGGTGSGFSSLLMER 741
Score = 71.7 bits (168), Expect = 3e-13
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 192 QC---TGLQGFLIFHSFGGGTGSGFSSLLMER 220
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 228
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 229 GGKYVPRAI 255
GK+VPRA+
Sbjct: 122 AGKHVPRAV 130
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 241 VPRAI 255
VPRA+
Sbjct: 574 VPRAV 578
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 71.3 bits (167), Expect = 5e-13
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 123
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 241 VPRAI 255
VPRA+
Sbjct: 61 VPRAV 65
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 70.5 bits (165), Expect = 8e-13
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 441 WRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 129 C---TGLQGFLIFHSFGGGTGSGFSSLLMER 156
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 438 SWR-LPTGLPTYTFPSVAATGF 500
L L ++F +GF
Sbjct: 546 QCSGLQGFLVFHSFGGGTGSGF 567
Score = 67.3 bits (157), Expect = 7e-12
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 441 WRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 114 C---TGLQGFLIFHSFGGGTGSGFSSLLMER 141
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 232 GKYVPRAISSTWSPA 276
GK+VPRA+ P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 273
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRK 928
Score = 68.9 bits (161), Expect = 2e-12
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRK 495
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 232 GKYVPRAISSTWSP 273
GK+VPRA+ + P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 241 VPRAI 255
VPRA+
Sbjct: 433 VPRAV 437
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 128 QC---TGLQGFLIFHSFGGGTGSGFASLLMER 156
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 67.3 bits (157), Expect = 7e-12
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK +
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 435 E 437
+
Sbjct: 1038 D 1038
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 66.9 bits (156), Expect = 1e-11
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
TGL + F S TG S L +R
Sbjct: 93 QC---TGLQGFLIFHSFGGGTGSGFSSLLMER 121
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 282 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESWRLPTGL 461
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ TGL
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC---TGL 69
Query: 462 PTY-TFPSV-AATGFRMGSSLSQR 527
+ F S TG S L +R
Sbjct: 70 QGFLIFHSFGGGTGSGFSSLLMER 93
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESWRLPTGLPT 467
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ TGL
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC---TGLQG 59
Query: 468 Y-TFPSV-AATGFRMGSSLSQR 527
+ F S TG S L +R
Sbjct: 60 FLIFHSFGGGTGSGFSSLLMER 81
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 238 YVPRAISSTWSPA 276
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAISSTWSPAPWTLSAPDL 303
+VPRA+ P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 321 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
P+ + G+ A NN+A+GHYT G + VD VLD +RK
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRK 114
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK-ESESWRLPTGLP 464
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK +++ PT +P
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKLVGINYQQPTAVP 62
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESWRLPTGLPT 467
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ TGL
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQC---TGLQG 59
Query: 468 Y-TFPSV-AATGFRMGSSLSQR 527
+ F S TG S L +R
Sbjct: 60 FLIFHSFGGGTGSGFSSLLMER 81
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 51.2 bits (117), Expect = 5e-07
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +3
Query: 342 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESWRLPTGLPTYTFPSVAATGFRMGSSLS 521
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+ G TG +GS L
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGF-QIAHSLGGGTGSGLGSLLL 60
Query: 522 QRFGE 536
+ E
Sbjct: 61 SKIRE 65
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 52 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 219
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 220 EASGGKY 240
E + GK+
Sbjct: 250 ETASGKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 121 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 222
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 321 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
P F Q G+GNNWA G G + +D VLD+V++E E
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVE 133
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 73 IVHLQAGQCGNQIGAKFWEIISDE 144
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 231 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 365
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_59596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 427 KNQNLGDCLQGFQLTHFPRWRQRGSVWDPPSLK 525
KNQ L D + TH+ R+RQ + + PP K
Sbjct: 64 KNQKLNDHGGHYHCTHYHRYRQPRNFYHPPQSK 96
>SB_9059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 427 KNQNLGDCLQGFQLTHFPRWRQRGSVWDPPSLK 525
KNQ L D + TH+ R+RQ + + PP K
Sbjct: 87 KNQKLNDHGGHYHCTHYHRYRQPRNFYHPPQSK 119
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 352 APDCPKTKLSGRKICPKGPERTESMVPGSKST 257
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 462 PTYTFPSVAATGFRMGSSLSQRFGE 536
PT T P++A G+++ +SL +FGE
Sbjct: 1280 PTPTMPTLAGDGYKIETSLRLKFGE 1304
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 462 PTYTFPSVAATGFRMGSSLSQRFGE 536
PT T P++A G+++ +SL +FGE
Sbjct: 244 PTPTMPTLAGDGYKIETSLRLKFGE 268
>SB_31115| Best HMM Match : zf-CCCH (HMM E-Value=0.039)
Length = 485
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 530 ESLREGGSHTEPRCRHRGKCVSWKPCR 450
E LR+G SHT C G+C CR
Sbjct: 182 EFLRKGSSHTPKVCPFLGRCTFGPRCR 208
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 219 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPELSSN 109
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_14873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 451 LQGFQLTHFPRWRQRGSVWDPPSLKDSV 534
L G L ++PRWR+R ++ L DSV
Sbjct: 39 LLGLVLNNYPRWRRRCRLFHKMKLDDSV 66
>SB_78| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 411 LDVVRKESESWRLPTGL-PTYTFPSVAA-TGFRMGSSLSQRFGE 536
+D V+K +WRLP+ L P AA T F G SL QRF E
Sbjct: 56 IDYVKKNFLNWRLPSELVPAMNITDDAAFTCFPTGESL-QRFYE 98
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,914,612
Number of Sequences: 59808
Number of extensions: 372912
Number of successful extensions: 1124
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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