Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30705
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 137 4e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 133 9e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 133 9e-32
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 132 1e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 132 2e-31
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 98 4e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 98 4e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 72 2e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 71 4e-13
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 71 4e-13
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 71 4e-13
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 71 4e-13
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 69 2e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 69 2e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 67 7e-12
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 67 7e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 67 7e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 67 7e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 61 6e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 2e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 2e-09
U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeo... 29 1.6
U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein. 29 1.6
AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine re... 28 4.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 137 bits (332), Expect = 4e-33
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 244 PRA 252
PRA
Sbjct: 61 PRA 63
Score = 133 bits (321), Expect = 9e-32
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 125 ESCDCLQGF-QMTHSLGGGTGSGMGTLLISKIRE 157
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 133 bits (321), Expect = 9e-32
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 125 ESTDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
Score = 126 bits (303), Expect = 1e-29
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 244 PRAI 255
PRA+
Sbjct: 61 PRAV 64
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 133 bits (321), Expect = 9e-32
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
ES G T TG MG+ L + E
Sbjct: 125 ESTDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
Score = 126 bits (303), Expect = 1e-29
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 244 PRAI 255
PRA+
Sbjct: 61 PRAV 64
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 132 bits (320), Expect = 1e-31
Identities = 66/94 (70%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E G T TG MG+ L + E
Sbjct: 125 EGCDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
Score = 129 bits (311), Expect = 1e-30
Identities = 69/139 (49%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 244 PRAISSTWSPAPW-TLSAPDLXXXXXXXXXXXXXXXXXXXXGPRDTTQRVLSSLTRSSM* 420
PRA+ P ++ + T+ + L + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG--AELVDNVLD 118
Query: 421 SAKNQNLG-DCLQGFQLTH 474
+ + G DCLQGFQLTH
Sbjct: 119 VVRKEAEGCDCLQGFQLTH 137
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 132 bits (319), Expect = 2e-31
Identities = 65/94 (69%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E G T TG MG+ L + E
Sbjct: 125 EGCDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
Score = 121 bits (292), Expect = 3e-28
Identities = 65/139 (46%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 244 PRAISSTWSPAPW-TLSAPDLXXXXXXXXXXXXXXXXXXXXGPRDTTQRVLSSLTRSSM* 420
PRA+ P ++ + T+ + L + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG--AELVDNVLD 118
Query: 421 SAKNQNLG-DCLQGFQLTH 474
+ + G DCLQGFQLTH
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 132 bits (319), Expect = 2e-31
Identities = 65/94 (69%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E G T TG MG+ L + E
Sbjct: 125 EGCDCLQGF-QLTHSLGGGTGSGMGTLLISKIRE 157
Score = 120 bits (289), Expect = 7e-28
Identities = 64/139 (46%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 244 PRAISSTWSPAPW-TLSAPDLXXXXXXXXXXXXXXXXXXXXGPRDTTQRVLSSLTRSSM* 420
PRA+ P ++ + T+ + L + +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG--AELVDNVLD 118
Query: 421 SAKNQNLG-DCLQGFQLTH 474
+ + G DCLQGFQLTH
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 83.8 bits (198), Expect = 7e-17
Identities = 34/62 (54%), Positives = 52/62 (83%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 435 ES 440
E+
Sbjct: 125 EA 126
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 83.8 bits (198), Expect = 7e-17
Identities = 34/62 (54%), Positives = 52/62 (83%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 435 ES 440
E+
Sbjct: 125 EA 126
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 423 RKESESWR-LPTGLPTYTFPSVAATGFR--MGSSLSQRFGE 536
RK++E+ L L ++F +GF + LS FG+
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGK 166
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 243
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 244 PRAI 255
PRAI
Sbjct: 66 PRAI 69
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 72.1 bits (169), Expect = 2e-13
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D V
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRV 122
Query: 423 RKESESWRLPTG-LPTYTFPSVAATGF 500
R+ +E + G L ++F +GF
Sbjct: 123 RRLTERCQSLQGFLIFHSFGGGTGSGF 149
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 237
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 238 YVPRAI 255
+VPRAI
Sbjct: 61 HVPRAI 66
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 60.5 bits (140), Expect = 8e-10
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 60.5 bits (140), Expect = 8e-10
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+
Sbjct: 72 MVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLV 131
Query: 435 ESWR-LPTGLPTYTFPSVAATGF 500
E+ R L L ++F +GF
Sbjct: 132 ENCRGLQGFLVFHSFGGGTGSGF 154
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGG 234
+ RE++ + GQ G Q+G WE+ EHGI P G + + L + + N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 235 KYVPRAISSTWSPAP 279
K+VPRAI P P
Sbjct: 65 KHVPRAIMVDLEPTP 79
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 423 RKESES 440
R+ +++
Sbjct: 121 RRLADN 126
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 244 PRAI 255
PR+I
Sbjct: 61 PRSI 64
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 67.7 bits (158), Expect = 5e-12
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 423 RK 428
R+
Sbjct: 120 RR 121
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 244 PRAI 255
PR+I
Sbjct: 60 PRSI 63
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 435 ESWR-LPTGLPTYTFPSVAATGF 500
++ L L ++F +GF
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGF 149
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +
Sbjct: 66 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 125
Query: 435 ESWR-LPTGLPTYTFPSVAATGF 500
++ L L ++F +GF
Sbjct: 126 DNCTGLQGFLVFHSFGGGTGSGF 148
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVMVDLEP 71
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 435 ESWR-LPTGLPTYTFPSVAATGF 500
++ L L ++F +GF
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGF 149
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 435 ESWR-LPTGLPTYTFPSVAATGF 500
++ L L ++F +GF
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGF 149
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 237
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 238 YVPRAI 255
+VPR +
Sbjct: 67 HVPRCL 72
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 423 RKESES 440
++ +E+
Sbjct: 129 KRLAEN 134
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 422
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 100
Query: 423 RKESES 440
++ +E+
Sbjct: 101 KRLAEN 106
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1
Query: 142 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAI 255
EHGI P G YH + D + E IN ++ E +GGK+VPR +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCL 44
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVR 425
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 426 KESESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
+E+E+ G+ +T TG GS L +R E
Sbjct: 126 REAENTNNLDGI-LFTHSVSGGTGSGTGSLLLERLRE 161
Score = 51.2 bits (117), Expect = 5e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +1
Query: 73 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 252
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 253 I 255
+
Sbjct: 66 V 66
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVR 425
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 426 KESESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
+E+E+ G+ +T TG GS L +R E
Sbjct: 126 REAENTNNLDGI-LFTHSVSGGTGSGTGSLLLERLRE 161
Score = 51.2 bits (117), Expect = 5e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +1
Query: 73 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 252
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 253 I 255
+
Sbjct: 66 V 66
>U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeobox
protein 20 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 464 NLHISLGGGNGVPYGILP 517
N H++LGG G PYG+LP
Sbjct: 265 NAHVTLGGMAGNPYGMLP 282
>U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 464 NLHISLGGGNGVPYGILP 517
N H++LGG G PYG+LP
Sbjct: 265 NAHVTLGGMAGNPYGMLP 282
>AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine
receptor, class w protein103 protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 370 RDTTQRVLSSLTRSSM*SAKNQNLGDCLQGFQLT 471
RDT +++L ++ + S KN+ G +QG Q+T
Sbjct: 335 RDTIRKMLGVTKKTKIASQKNKTSGVSIQGIQMT 368
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,860
Number of Sequences: 27780
Number of extensions: 276239
Number of successful extensions: 985
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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