Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30705
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 130 6e-31
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 130 6e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 130 6e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 130 8e-31
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 130 8e-31
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 128 2e-30
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 128 3e-30
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 127 5e-30
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 127 5e-30
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 75 4e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 75 4e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 74 7e-14
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 74 7e-14
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 74 7e-14
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 74 7e-14
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 72 3e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 60 9e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 60 9e-10
At4g37190.1 68417.m05265 expressed protein 31 0.37
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 2.6
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 28 4.5
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 28 4.5
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 4.5
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 27 6.0
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 6.0
At2g24930.1 68415.m02981 Ulp1 protease family protein contains P... 27 6.0
At2g02040.1 68415.m00139 peptide transporter (PTR2-B) / oligopep... 27 6.0
At1g73920.2 68414.m08561 lipase family protein similar to lipase... 27 6.0
At1g73920.1 68414.m08560 lipase family protein similar to lipase... 27 6.0
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 27 7.9
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 7.9
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 130 bits (314), Expect = 6e-31
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 115 bits (277), Expect = 2e-26
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (314), Expect = 6e-31
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 118 bits (284), Expect = 2e-27
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 130 bits (314), Expect = 6e-31
Identities = 64/94 (68%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 116 bits (278), Expect = 1e-26
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (313), Expect = 8e-31
Identities = 57/62 (91%), Positives = 62/62 (100%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ES 440
E+
Sbjct: 125 EN 126
Score = 120 bits (290), Expect = 5e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 130 bits (313), Expect = 8e-31
Identities = 63/94 (67%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 126 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 158
Score = 120 bits (289), Expect = 6e-28
Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 128 bits (310), Expect = 2e-30
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 126 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 158
Score = 124 bits (300), Expect = 3e-29
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (308), Expect = 3e-30
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 122 bits (294), Expect = 2e-28
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRAI P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 5e-30
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 121 bits (291), Expect = 4e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 5e-30
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E+ G TG MG+ L + E
Sbjct: 125 ENCDCLQGFQV-CHSLGGGTGSGMGTLLISKIRE 157
Score = 121 bits (291), Expect = 4e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 74.5 bits (175), Expect = 4e-14
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 74.5 bits (175), Expect = 4e-14
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 56.8 bits (131), Expect = 9e-09
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 56.8 bits (131), Expect = 9e-09
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 3e-13
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK ++
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 438 SWRLPTGLPTY-TFPSV-AATGFRMGSSLSQR 527
+ TGL + F +V TG +GS L +R
Sbjct: 128 NC---TGLQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 60.1 bits (139), Expect = 9e-10
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 60.1 bits (139), Expect = 9e-10
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E++ G TG MGS L + +
Sbjct: 125 EADGSDSLEGF-VLCHSIAGGTGSGMGSYLLETLND 159
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 60.1 bits (139), Expect = 9e-10
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESWRLPTGLPTYTFPSVAATGFRMGSSLSQRFGE 536
E++ G TG MGS L + +
Sbjct: 125 EADGSDSLEGF-VLCHSIAGGTGSGMGSYLLETLND 159
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.5 bits (68), Expect = 0.37
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 231
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 232 GKYVPRAISSTWSPAPWTLSA 294
Y PR +S A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 63 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 149
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 369 KGHYTEGAELVDSVLDVVRKESESWRLPTGLPTYTFPSVAATGFRMGSSLSQ 524
+G + EG ++D+ + R ++ S PTGLP+ T S + S L Q
Sbjct: 291 QGPHAEG--IIDASEVLTRSDTASTAAPTGLPSQTSTSEGVEKLTLTSDLKQ 340
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 267 PSRRDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSNLVTTL 94
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S + V TL
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 410 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 294
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 425 ADYIEDRVNELSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGADRVHGAGLQVDEM 252
AD ED++ EL +LC + + GAG +D + G+ GAG +++E+
Sbjct: 595 ADEFEDKMKELESLCNPIIARMYQGAGPDMGGAGGMDDDTPAGGSG---GAGPKIEEV 649
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 70 EIVHLQAGQCGNQIGAKFWEIISD 141
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 926
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 384 EGAELVDSVLDVVRK---ESESWRLPTGLPTYTFPSVAATG 497
E AEL V+DV K + S P +PT+TFP + G
Sbjct: 589 EKAELDSDVVDVTDKLAPDGSSLINPEDMPTHTFPVIGDNG 629
>At2g02040.1 68415.m00139 peptide transporter (PTR2-B) /
oligopeptide transporter 1-1, putative (OPT1-1)
identical to peptide transporter PTR2-B SP:P46032 from
[Arabidopsis thaliana]; contains Pfam profile: PF00854
POT family; identical to cDNA NT1 GI:510237
Length = 585
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +3
Query: 360 NWAKGHYTEGAELVDSVLDVVRKESESWRLPTGLPTYTFPSVAATGFRMGSSL 518
NW GA LV S L V +E+ W L G+PT F +A F G+ L
Sbjct: 202 NWFYFSINIGA-LVSSSLLVWIQENRGWGLGFGIPT-VFMGLAIASFFFGTPL 252
>At1g73920.2 68414.m08561 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 635
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 396 LVDSVLD-VVRKESESWRLPTGLPTYTFPSVAATGFRMGSSLSQ 524
LV +++ VV +S +W GLP Y + A FR+ L+Q
Sbjct: 463 LVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPAVSFRVAQHLAQ 506
>At1g73920.1 68414.m08560 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 704
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 396 LVDSVLD-VVRKESESWRLPTGLPTYTFPSVAATGFRMGSSLSQ 524
LV +++ VV +S +W GLP Y + A FR+ L+Q
Sbjct: 532 LVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPAVSFRVAQHLAQ 575
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNEASGG 234
YK E V L C N++G IS HG + +G ++ +L+ +N+ Y +A+
Sbjct: 213 YKFHEKVQLDYSICSNELGDP--NAISKVHGREDINYLNGLTNNAKLKFLNLMY-DATPS 269
Query: 235 KYVPRAIS 258
Y+ I+
Sbjct: 270 DYISMIIT 277
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 85 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 177
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,526,025
Number of Sequences: 28952
Number of extensions: 266321
Number of successful extensions: 893
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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