Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30701
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 33 0.19
SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086) 31 0.76
SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) 31 1.00
SB_58746| Best HMM Match : RA (HMM E-Value=0.85) 31 1.00
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 3.0
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 3.0
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 29 4.0
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 28 7.0
SB_4761| Best HMM Match : Ank (HMM E-Value=1.99993e-41) 28 7.0
SB_1589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) 28 9.3
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 34.7 bits (76), Expect = 0.081
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +3
Query: 141 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 248
P+H T + VP P PV S PQ KVPIP PYPV
Sbjct: 447 PFH-TPPRVEHVPFPIPVH-SPPQIEKVPIPFPYPV 480
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 168 IGVPIPHPVAVSVPQYVKVPIPQPYPV 248
+ VP+P PV V VP + + P+P P P+
Sbjct: 1092 VPVPVPVPVRVPVPMHQQSPLPMPRPI 1118
>SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086)
Length = 404
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 418 GIGLRDGHLYFFFDLNGIRLFDFIGHWFFD--RVRYWFFNNLVDNLINRY 275
G+ + +G Y F L G+R+ + G+W F+ RVR+++ + I Y
Sbjct: 301 GVRVIEGSGYLMFGLLGVRVIEGSGYWVFELLRVRHYYATTWSRSAIGDY 350
>SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)
Length = 306
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 108 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVQWSNLSMYLFI 287
P+G + EHT ++ ++ I I +PV + V VP +P P L YL +
Sbjct: 145 PKGSQNNEHTSNNYINILVTIRTEIVYPVRPVIGAAVAVPDRRPCPWVSYVKALDWYLIV 204
>SB_58746| Best HMM Match : RA (HMM E-Value=0.85)
Length = 820
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 341 VFDMFGYSVFDMFGYSVFDMFCYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 391
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 309 VFDMFGYSVFDLFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 359
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 389 VFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 439
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 293 VFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDLFGYSVFD 343
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 365 VFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 415
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 413 VFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 463
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 421 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 471
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 429 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 479
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 437 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 487
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 445 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 495
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 453 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 503
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 461 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 511
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 469 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 519
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 477 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 527
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 485 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 535
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 269 VFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 319
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 277 VFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFD 327
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 373 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFD 423
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 397 VFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 447
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 451 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 305
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 317 VFDLFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFCYSVFD 367
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 123 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVH 251
H H P+ V V + VP PV V VP V+VP+P PV+
Sbjct: 208 HHHHHHPFPVRV--PVRVPFRVPVRVPVP--VRVPVPIHSPVY 246
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQP-YP 245
H H H P V V VP+ PV V VP VPI P YP
Sbjct: 208 HHHHHHPFPVRVPVRVPFRVPVRVPVPVRVP----VPIHSPVYP 247
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 135 TKPYHVTVVKKIGVPIPHP----VAVSVPQYVKVPIPQPYP 245
+KP +K V P P ++ +P Y+ VP+PQP P
Sbjct: 96 SKPMREDAKRKFLVLAPFPRMPLISPPLPMYIPVPVPQPVP 136
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 168 IGVPIPHPVAVSVPQYVKVPIPQP 239
I P+P + V VPQ V P+PQP
Sbjct: 119 ISPPLPMYIPVPVPQPVPQPVPQP 142
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 228 IPQPYPVHV--QWSNLSMYLFIRLSTKLLKNQYRTRSKNQCPMKSKSLIPLRSKKK*RCP 401
I +PY +H+ + + + ++FIRL +Y + QCP S ++ K P
Sbjct: 244 IHEPYSLHILIKMNQVYCFIFIRLHLNTAHEKYDVCAWPQCPFVSDRTFDIQHKVPVAAP 303
Query: 402 SLSP 413
P
Sbjct: 304 RSKP 307
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 2 TEVERT-SVRQHDRF*NNSRPSLS-SARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRS 175
T ER+ R ++ + RP S ++RS R +RPH R+HE +R EE+R+
Sbjct: 436 THEERSHKERSQEKRSHEKRPHEERSHKERSQEKRSHEKRPHEERSHE----ERSEEERT 491
Query: 176 SDSPS 190
+ S
Sbjct: 492 HEERS 496
>SB_4761| Best HMM Match : Ank (HMM E-Value=1.99993e-41)
Length = 710
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 629 SEISKFNYFFFKSLTPKINYPTKFV-NTLEYAYQNIYLQTV*KFNWV*IETRSFSVYPPY 453
S ++ + FK P++ + + ++ E Y++ + +F W + RS SV PY
Sbjct: 638 SNMNSAGQWMFKVGWPRMRHLGVYAADSYEEEYRDYFFVEQCEFTWS-VLVRSVSVLGPY 696
Query: 452 GGRCVCT 432
C CT
Sbjct: 697 WSECECT 703
>SB_1589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 418 GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVR 320
GI D + D +R+F+F G+W F+ +R
Sbjct: 10 GIKPNDSWICLRDDFGDVRVFEFSGYWMFELLR 42
>SB_51795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.3 bits (60), Expect = 7.0
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -2
Query: 373 NGIRLFDFIGHWFFDRVR 320
+G R+F+F+G+W F+ +R
Sbjct: 30 SGYRMFEFLGYWMFELLR 47
>SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 123 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 233
+ + T PY V + V +P+ V V+VP YV V +P
Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93
>SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 123 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 233
+ + T PY V + V +P+ V V+VP YV V +P
Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93
>SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4)
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 177 PIPHPVAVSVPQY--VKVPIPQPYPVHVQWSN 266
PI HP+ V +P +KV +P +P+ V N
Sbjct: 63 PIKHPIKVHLPNKHPIKVHLPNKHPIKVHLPN 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,930,456
Number of Sequences: 59808
Number of extensions: 549072
Number of successful extensions: 1745
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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