Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30699
(895 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 33 0.41
SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4) 31 0.95
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25) 31 1.7
SB_23882| Best HMM Match : Cyt-b5 (HMM E-Value=9.2e-19) 31 1.7
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_32794| Best HMM Match : Gam (HMM E-Value=5.8) 30 2.2
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 30 2.2
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 2.2
SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3) 29 3.8
SB_57200| Best HMM Match : Plasmodium_HRP (HMM E-Value=4.7) 29 5.1
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16487| Best HMM Match : ITAM (HMM E-Value=0.24) 29 5.1
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 29 5.1
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 6.7
SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055) 29 6.7
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 29 6.7
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 28 8.9
SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 28 8.9
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45) 28 8.9
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 28 8.9
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 35.9 bits (79), Expect = 0.044
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQ---GHNGGQNFAY--GGQDFSGGQGHTIALTQEGGGHDFSEAQ 228
+ G+ GGY G G+ GG Y GG D+SGG G+ + GGG D+
Sbjct: 147 RGGYRGGYRGGYRGGRDRGGGYGGGGEGGYGMGGGDYSGGCGYG---SSYGGGGDYGGGP 203
Query: 229 ALGG 240
GG
Sbjct: 204 GYGG 207
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G GG + G + GG ++ GG + GGQG+ GG +D+ + L H +
Sbjct: 177 GMGGGDYSGGCGYGSSYGGGGDYG-GGPGYGGGQGYGSYSGGGGGNYDYQGNKTL-HHLI 234
Query: 250 GPRSLDM 270
R LD+
Sbjct: 235 DRRLLDV 241
>SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 35.1 bits (77), Expect = 0.077
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 76 EGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
+GG S++ D+ G GG N + GG D GG G GGG D GG++ G
Sbjct: 154 DGGGSDDGGDDDDGDGGGSNGSGGGDD--GGDGGDDGGGSGGGGDDGGSDGGGGGNDGG 210
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 32.7 bits (71), Expect = 0.41
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHD 213
K G+ GG G +G GG +GG + GG H +GGG+D
Sbjct: 199 KGGYGGGSGGGGYGGGRG-GGGYGGGHGGGGYGGGGRHDYGGGSKGGGYD 247
>SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4)
Length = 246
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3
Query: 167 PPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQ 60
PP S PP + PP P S+P++SL PPS+ LQ
Sbjct: 158 PPPSSSPPLSS--PPPPPPSTPSSSLLPPPSSSPLQ 191
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 473 VTAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIALTQLVS*IMCCLKVRVTA 294
VT + A +T T +T+ T T VTA +A+T V+ VTA
Sbjct: 261 VTVTATVTATVTATVTVTATTTVTVTATATVTVIVTVTATLAVTVTVTETAAAATATVTA 320
Query: 293 KVST 282
V+T
Sbjct: 321 TVTT 324
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 473 VTAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIALTQLVS*IMCCLKVRVT 297
VT A +TVT T TV T T VTA +T +V+ + L V VT
Sbjct: 249 VTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVTATATVTVIVT-VTATLAVTVT 306
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = -3
Query: 476 IVTAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIALTQLVS*IMCCLKVRVT 297
++ V AA T T +TS TV T VTA + +T + + V T
Sbjct: 632 VIVTVKAAAATATATVTVTSTVTATATVTATVTATATVTATVTVTATAT-ATATVTVTAT 690
Query: 296 AKVSTDGCA 270
A V+ A
Sbjct: 691 ATVTATATA 699
>SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25)
Length = 816
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 599 FGKICMISHGKWLPRDRHNSPAMAVNHALHLKSKRLDLARRI 474
FG + I HG++ R+ +MA+N + R LARR+
Sbjct: 394 FGNVTAIIHGQYSSNFRYRKESMAINEFVRFYKIRNPLARRL 435
>SB_23882| Best HMM Match : Cyt-b5 (HMM E-Value=9.2e-19)
Length = 167
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 43 LLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQG 174
L A +C +GG +N+ G + G GG GG D GG G
Sbjct: 85 LQAELSCNGDDDGGGNNDDDGVDDGVGGGGGDDSGGDDDGGGVG 128
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 167 PPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 66
P + +PP F PP P S P T YPP+ P+
Sbjct: 174 PTQPFYPPTQPFYPPT-PSSYPPTQPSYPPTAPS 206
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 167 PPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 66
P + S+PP A PP P S P + YPP+ P+
Sbjct: 195 PTQPSYPPTAPSYPPT-PSSYPPIAASYPPTAPS 227
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 155 SWPPYAKF*PPLWPCSSPATSLEYPPSNPA 66
S+PP F PP P P S YPP+ P+
Sbjct: 171 SYPPTQPFYPPTQPFYPPTPS-SYPPTQPS 199
>SB_32794| Best HMM Match : Gam (HMM E-Value=5.8)
Length = 511
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 154 LGRRMRNFD-PRYGPAHLQQLRWSIHLRTQP 65
LGRR R+ D PRY P ++Q L S+H + P
Sbjct: 26 LGRRHRSDDLPRYNPVNIQMLSASLHEQLFP 56
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH---DFSEAQAL 234
+AG +GG S E G +GG A GG +GG +++ G + + EA
Sbjct: 568 EAGEDGGASEAGGASEAGEDGGAGEA-GGASEAGGASEAGEVSEAGEANEAGEIGEASEA 626
Query: 235 GGHN 246
GG N
Sbjct: 627 GGAN 630
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 797 ENRRFSGSQNLGTTNGALFNGVFLTGIKVLKVTPNLK 687
E R FS S+ + TNG+ +NG ++ + + PN K
Sbjct: 342 EKRTFSSSELMNPTNGSYYNGFVVSFDHPVTILPNTK 378
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +3
Query: 564 PFPVGNHTDFPKARFQVTPFNKHVNFPSSQAYSHLTCPKPNF*VRSYLQNLYSS*KYPVK 743
P P H +P TP H + P + S P+P +Y Y S K+P
Sbjct: 166 PHPTYKHPSYPTYNIPPTP---HTSIPPTPHTSIPPTPRP-----TYKHPSYPSYKHPSY 217
Query: 744 QSPVGCSQVLRTGKSSIFPIRKKVLLPLTPSSFKSI 851
S + +L ++S+ P+ +P TP+ SI
Sbjct: 218 PSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSI 253
>SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3)
Length = 292
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 76 EGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGP 255
EGG S +Q GG+ GG GG G +++ GGG +GG ++G
Sbjct: 113 EGGPSEGGLMQKQFIEGGEGGMGGGMSMGGGMGGGMSMGGMGGG----MGGMMGGGSMGG 168
Query: 256 RSLDMA 273
+ MA
Sbjct: 169 GMMSMA 174
>SB_57200| Best HMM Match : Plasmodium_HRP (HMM E-Value=4.7)
Length = 346
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Frame = -3
Query: 173 PWPPEKS-----WPPYAKF*PPLWPCSSPATSLEYPP 78
PWPP++S WPP WP +L +PP
Sbjct: 239 PWPPKQSVRALPWPPKQSVRALPWPAIQSIRALPWPP 275
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 229 ALGGHNLGPRSLDMAHPSVETLAVTRTFKQHMIQDTNWVKAI 354
A G N P SLD S+ET+ T K +DT VKA+
Sbjct: 2605 AAGQENADPTSLDKTTESLETVTADDTLKAEKTEDT--VKAL 2644
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 474 RDRRPRLGC*NHRDRPHHQRTRSHHHRGRN 385
RD+R R ++ DR HQR R HHR R+
Sbjct: 134 RDQRYR----DYEDRERHQRGRDRHHRDRD 159
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 301 SPPKSPPMGAPCPKIWVPDYDHPKL 227
S P+ PP GAP P++ P HP++
Sbjct: 557 SHPRVPPPGAPHPRVPPPGAPHPRV 581
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 539 PRVPPPGAPHPRVPPPGASHPRV 561
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 439 PRFPPPGAPHPRVPPPGAPHPRV 461
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 449 PRVPPPGAPHPRVPPPGAPHPRV 471
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 459 PRVPPPGAPHPRVPPPGAPHPRV 481
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 469 PRVPPPGAPHPRVPPPGAPHPRV 491
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 509 PRVPPPGAPHPRVPPPGAPHPRV 531
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 519 PRVPPPGAPHPRVPPPGAPHPRV 541
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 529 PRVPPPGAPHPRVPPPGAPHPRV 551
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 295 PKSPPMGAPCPKIWVPDYDHPKL 227
P+ PP GAP P++ P HP++
Sbjct: 569 PRVPPPGAPHPRVPPPGTPHPRV 591
>SB_16487| Best HMM Match : ITAM (HMM E-Value=0.24)
Length = 815
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGG-QDFSGGQ--GHTIALTQEGGGHDFSEAQALGGH 243
GGY G+ G N + GG Q S GH T GGH ++GGH
Sbjct: 294 GGYQAISTDSIGGYQGISNVSIGGYQGISTDSIGGHQAISTDSIGGHQGISTDSIGGH 351
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 441 HRDRPHHQRTRSHHHRGRNP 382
HR HH R R HHH +P
Sbjct: 197 HRRHHHHHRHRHHHHHPNHP 216
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 441 HRDRPHHQRTRSHHHRGRN 385
HR R H+ R R HHH R+
Sbjct: 188 HRHRQHYNRHRRHHHHHRH 206
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPR 258
GG S G G NGG + GG SGG G + G G A G + G
Sbjct: 777 GGASGGAGGSSGGANGGAGSSSGGA--SGGAGGSSGGASGGAGGSSGGASGGAGSSSGGA 834
Query: 259 S 261
S
Sbjct: 835 S 835
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -2
Query: 435 DRPHH-QRTRSHHHRGRNPLDRQNCDRRNRLDPIGV-LNH---VLLEGTCHRQSLHRWV 274
DR H +R R H HRGR + R NR I V L + L T RQ L +WV
Sbjct: 719 DRNHGPERARLHIHRGRGKTGAWSARRNNRYQWIQVDLRSRAVIKLIATQGRQDLDQWV 777
>SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055)
Length = 199
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 473 VTAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIALT 342
VTA + +TVTA +T TV T VTA + +T
Sbjct: 146 VTATATVTVTVTVTATVTVTATVTATVTATATATATVTATVTVT 189
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 28.7 bits (61), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 441 HRDRPHHQRTRSHHHR 394
H DR HH R HHH+
Sbjct: 348 HHDRNHHHRHHHHHHK 363
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 595 PKPGSKLPLLTSTLIFPVHKPIH-I*PAPNPIFKFGVTFKTFIPVKNTPLNKAPLVVPK 768
P P K P + + ++ P I P P+ + V+ T P P N AP+V+ +
Sbjct: 277 PTPAQKKPYIPTKILQATPTPTATIAPPPSRVDASTVSIPTVRPTVTVPSNNAPVVISR 335
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 444 NHRDRPHHQRTRSHHHRGR 388
NH HH+R HHHR R
Sbjct: 733 NHHAHYHHRRHHHHHHRRR 751
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = +1
Query: 91 NEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
N + G+NGG N GG D S G GG + GG+N G
Sbjct: 537 NNGGNNNGGNNGGSN--NGGNDGSNNNGGNTGGNNNGGNTGGNNGGNTGGNNNG 588
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 28.3 bits (60), Expect = 8.9
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -2
Query: 330 LNHVLLEGTCHRQSLHRWVRHVQRSGSQIMTTQSLSFRKVMTSSFLC*GYCVSLAS*KVL 151
L+ V++ CH+ H+W H Q ++ LS R V+TS F+ G C S VL
Sbjct: 711 LSQVVVTSGCHQWFCHQWFCH-QWFCHGWLSPVVLS-RVVVTSGFVTSG-CHEWLSLVVL 767
Query: 150 AAVCEILTPVM--ALLISSNFV 91
+ V +L+PV+ ++++S FV
Sbjct: 768 SPV--VLSPVVLSRVVVTSGFV 787
>SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = -2
Query: 423 HQRTRSHH-HRGRNPLDR---QNCDRRNRLDPIGVLNHVLLEGTCHRQSLHRWVRHVQRS 256
H R R+H + +P R QN R G H + CHR S+ + VR +RS
Sbjct: 18 HPRARAHDTDQPSDPCQRSADQNPYPTQRDSQPGAGKHPCSDAGCHRHSMGQIVRKARRS 77
Query: 255 G 253
G
Sbjct: 78 G 78
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 444 NHRDRPHHQRTRSHHHRGR 388
NH HH+R HHHR R
Sbjct: 760 NHHAHYHHRRHHHHHHRRR 778
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQNCD 361
P RRPRL HR RP R HR R L R + D
Sbjct: 183 PRLHTRRPRL----HRRRPRLHTRRPRRHRRRPRLHRHDLD 219
>SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45)
Length = 979
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3
Query: 524 NHALHLKSKRLDLARRIVTAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIAL 345
N A + ++ +DLA T LA A I A++ ++ TP+ AKI AE+AL
Sbjct: 485 NRATPVLARMVDLAP---TNQTTLATHALARASIRGQNAKLKSIHATPVLAKI--AELAL 539
Query: 344 TQ 339
T+
Sbjct: 540 TR 541
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -3
Query: 470 TAVPVLAAEITVTARITSVRARITTVGETPLTAKIVTAEIALT 342
T AE T TA T+ A ITT T + TAE T
Sbjct: 327 TTEAAATAEATTTATATTTTAAITTTAATTTSEAAATAEATTT 369
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 486 GPPYRDRRPRLGC*NHRDRPHHQRTR-SHHHRGRNPLDRQNCDRRNR 349
G RD RPR +R H+ R H R P+ + DRR+R
Sbjct: 1835 GMDRRDERPRPDIDRRDERLRHEADRRGDRHDERRPMPERKDDRRDR 1881
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,093,012
Number of Sequences: 59808
Number of extensions: 696132
Number of successful extensions: 2774
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2704
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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