Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30699
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M77663-1|AAA59199.1| 384|Homo sapiens keratin 10 protein. 32 3.2
AJ549094-1|CAD79344.1| 396|Homo sapiens FUS/BBF2H7 protein prot... 32 3.2
CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein. 31 4.3
BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein. 31 4.3
BC112218-1|AAI12219.1| 94|Homo sapiens RPTN protein protein. 31 4.3
BC112216-1|AAI12217.1| 95|Homo sapiens RPTN protein protein. 31 4.3
BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein. 31 4.3
BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein. 31 4.3
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 31 4.3
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 31 4.3
AK096436-1|BAC04789.1| 439|Homo sapiens protein ( Homo sapiens ... 31 4.3
AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain prote... 31 4.3
BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein... 31 5.6
BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein... 31 5.6
AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related pr... 31 5.6
AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein... 31 5.6
Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein. 31 7.5
X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein. 31 7.5
S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein. 31 7.5
BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein. 31 7.5
BC031286-1|AAH31286.1| 408|Homo sapiens chromosome 17 open read... 31 7.5
BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolyt... 30 9.9
>M77663-1|AAA59199.1| 384|Homo sapiens keratin 10 protein.
Length = 384
Score = 31.9 bits (69), Expect = 3.2
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQ---GHNGGQNFAYGGQDFSGG-QGHTIALTQEGGGHDFSEAQALGG 240
F GGY +G GH G YGG GG G GGH S + GG
Sbjct: 273 FGGGYGGGSSGGGSSGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGG 332
Query: 241 HNLG 252
+ G
Sbjct: 333 GSSG 336
>AJ549094-1|CAD79344.1| 396|Homo sapiens FUS/BBF2H7 protein
protein.
Length = 396
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGG--HDFSEAQALGGH 243
G G Y + + G GG YG QD SGG G Q+ GG H FS Q
Sbjct: 55 GGGGNYGQDQSSMSSG--GGSGGGYGNQDQSGGGGSGGYGQQDRGGRLHPFSLPQTHSPS 112
Query: 244 NLGPRS 261
PR+
Sbjct: 113 RAAPRA 118
>CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein.
Length = 615
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQN--CD 361
PP + RRPR R H HHH R+P R++ CD
Sbjct: 493 PPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCD 535
>BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQN--CD 361
PP + RRPR R H HHH R+P R++ CD
Sbjct: 493 PPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCD 535
>BC112218-1|AAI12219.1| 94|Homo sapiens RPTN protein protein.
Length = 94
Score = 31.5 bits (68), Expect = 4.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 RDRRPRLGC*NH--RDRPHHQRTRSHHHRGRNP-LDRQNCDRRNRLDPIGVLNH 322
+DRR NH RDR H+ +SH R R D+QN RR+R NH
Sbjct: 39 QDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNH 92
>BC112216-1|AAI12217.1| 95|Homo sapiens RPTN protein protein.
Length = 95
Score = 31.5 bits (68), Expect = 4.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 RDRRPRLGC*NH--RDRPHHQRTRSHHHRGRNP-LDRQNCDRRNRLDPIGVLNH 322
+DRR NH RDR H+ +SH R R D+QN RR+R NH
Sbjct: 40 QDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNH 93
>BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQN--CD 361
PP + RRPR R H HHH R+P R++ CD
Sbjct: 493 PPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCD 535
>BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQN--CD 361
PP + RRPR R H HHH R+P R++ CD
Sbjct: 493 PPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCD 535
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 31.5 bits (68), Expect = 4.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 RDRRPRLGC*NH--RDRPHHQRTRSHHHRGRNP-LDRQNCDRRNRLDPIGVLNH 322
+DRR NH RDR H+ +SH R R D+QN RR+R NH
Sbjct: 729 QDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNH 782
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 31.5 bits (68), Expect = 4.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 RDRRPRLGC*NH--RDRPHHQRTRSHHHRGRNP-LDRQNCDRRNRLDPIGVLNH 322
+DRR NH RDR H+ +SH R R D+QN RR+R NH
Sbjct: 729 QDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNH 782
>AK096436-1|BAC04789.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ39117 fis, clone NTONG2006440, moderately
similar to REPETIN. ).
Length = 439
Score = 31.5 bits (68), Expect = 4.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 RDRRPRLGC*NH--RDRPHHQRTRSHHHRGRNP-LDRQNCDRRNRLDPIGVLNH 322
+DRR NH RDR H+ +SH R R D+QN RR+R NH
Sbjct: 384 QDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNH 437
>AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain protein
protein.
Length = 615
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 483 PPYRDRRPRLGC*NHRDRPHHQRTRSHHHRGRNPLDRQN--CD 361
PP + RRPR R H HHH R+P R++ CD
Sbjct: 493 PPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCD 535
>BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 143 YAKF*PPLWPCSSPATSLEYPPSNPALQVATA 48
Y F PP PCS+ +Y PS VATA
Sbjct: 1522 YRHFAPPTTPCSTDVCDSDYAPSRRMTSVATA 1553
>BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 143 YAKF*PPLWPCSSPATSLEYPPSNPALQVATA 48
Y F PP PCS+ +Y PS VATA
Sbjct: 1522 YRHFAPPTTPCSTDVCDSDYAPSRRMTSVATA 1553
>AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related protein
6 protein.
Length = 1613
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 143 YAKF*PPLWPCSSPATSLEYPPSNPALQVATA 48
Y F PP PCS+ +Y PS VATA
Sbjct: 1522 YRHFAPPTTPCSTDVCDSDYAPSRRMTSVATA 1553
>AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein
receptor-related protein 6 variant protein.
Length = 1477
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 143 YAKF*PPLWPCSSPATSLEYPPSNPALQVATA 48
Y F PP PCS+ +Y PS VATA
Sbjct: 1386 YRHFAPPTTPCSTDVCDSDYAPSRRMTSVATA 1417
>Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
+ GG S G G GG +YGG SGG GGGH GGH+ G
Sbjct: 497 YGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSG---GGHSGG 553
>X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein.
Length = 622
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
+ GG S G G GG +YGG SGG GGGH GGH+ G
Sbjct: 496 YGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSG---GGHSGG 552
>S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein.
Length = 622
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
+ GG S G G GG +YGG SGG GGGH GGH+ G
Sbjct: 496 YGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSG---GGHSGG 552
>BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein.
Length = 467
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
+ GG S G G GG +YGG SGG GGGH GGH+ G
Sbjct: 341 YGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSG---GGHSGG 397
>BC031286-1|AAH31286.1| 408|Homo sapiens chromosome 17 open reading
frame 74 protein.
Length = 408
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 474 RDRRPRLGC*NHRDRPHHQRTRSHHHR-GRNPLDRQNCDRRNRL 346
R RR R C NH+ RP + R H H RNP Q + +R+
Sbjct: 130 RHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHRSQKMSQLHRV 173
>BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolytic
hyperkeratosis; keratosis palmaris et plantaris)
protein.
Length = 584
Score = 30.3 bits (65), Expect = 9.9
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGG-QGHTIALTQEGGGHDFSEAQALGGHN 246
G GG S+ G GH G YGG GG G GGH S + GG +
Sbjct: 476 GSSGGGSSG-GGYGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGS 534
Query: 247 LG 252
G
Sbjct: 535 SG 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,648,407
Number of Sequences: 237096
Number of extensions: 3547776
Number of successful extensions: 10163
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9986
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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