Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30699
(895 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05440.2 68415.m00575 glycine-rich protein 38 0.012
At1g15840.1 68414.m01901 expressed protein 36 0.048
At4g15460.1 68417.m02363 glycine-rich protein 35 0.084
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 34 0.11
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 34 0.15
At2g05510.1 68415.m00583 glycine-rich protein 32 0.45
At2g17870.1 68415.m02070 cold-shock DNA-binding family protein c... 31 0.78
At2g05440.1 68415.m00574 glycine-rich protein 31 0.78
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 31 0.78
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 31 1.0
At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family... 31 1.4
At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to SP... 30 1.8
At3g60320.1 68416.m06742 expressed protein contains Pfam profile... 30 1.8
At1g77030.1 68414.m08970 glycine-rich protein 30 1.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 30 2.4
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 30 2.4
At5g09930.1 68418.m01148 ABC transporter family protein 30 2.4
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 2.4
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 29 3.1
At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar... 29 4.2
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 29 4.2
At5g46730.1 68418.m05757 glycine-rich protein 29 5.5
At2g40610.1 68415.m05009 expansin, putative (EXP8) similar to ex... 29 5.5
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 29 5.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 5.5
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 28 7.3
At5g40500.1 68418.m04912 expressed protein 28 7.3
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 28 7.3
At3g63100.1 68416.m07087 glycine-rich protein 28 7.3
At3g25050.1 68416.m03130 xyloglucan:xyloglucosyl transferase, pu... 28 7.3
At3g19990.1 68416.m02529 expressed protein 28 7.3
At2g05530.1 68415.m00585 glycine-rich protein 28 7.3
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 7.3
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 28 7.3
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 28 7.3
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 28 7.3
At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family... 28 7.3
At3g08790.1 68416.m01021 VHS domain-containing protein / GAT dom... 28 9.6
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 28 9.6
At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)... 28 9.6
At2g19000.1 68415.m02217 expressed protein 28 9.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 9.6
At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein... 28 9.6
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 222
G GG G GH GG ++ GG + GG GH GGGH +E
Sbjct: 101 GHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGH-----HGGGGHGLNE 146
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 210
G+ GG+ G GH GG +GG +GG GH + GGGH
Sbjct: 42 GYGGGH-----GGHGGHGGGGGHGHGGH--NGGGGHGLDGYGGGGGH 81
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +1
Query: 40 LLLAVATCKAGFEGGY---SNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 210
+LL V+ A + G +E +G+ GG +GG GG GH GGGH
Sbjct: 14 VLLVVSEVSAARQSGMVKPESEETVQPEGYGGGHG-GHGGHGGGGGHGH--GGHNGGGGH 70
Query: 211 DFSEAQALGGH 243
GGH
Sbjct: 71 GLDGYGGGGGH 81
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G+ GG + G GG ++ GG + GG GH GGGH GG
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGGGGH---YGGGGGGHGGGGHYGGGGGGY 130
Query: 250 G 252
G
Sbjct: 131 G 131
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAY--GGQDFSGGQGHTIALTQEGGGH 210
GG+ + G GH GG Y GG + GG GH GGGH
Sbjct: 68 GGHGLDGYGGGGGHYGGGGGHYGGGGGHYGGGGGH----YGGGGGH 109
>At1g15840.1 68414.m01901 expressed protein
Length = 126
Score = 35.5 bits (78), Expect = 0.048
Identities = 24/61 (39%), Positives = 27/61 (44%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G EGG +G E G GG GG SGG GH L GGG D ++ G L
Sbjct: 40 GGEGGGGEGTSG-EGGGGGGDGTKGGGDGISGG-GHGDGLGCSGGGGDGTKGGGRRGDGL 97
Query: 250 G 252
G
Sbjct: 98 G 98
>At4g15460.1 68417.m02363 glycine-rich protein
Length = 148
Score = 34.7 bits (76), Expect = 0.084
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 82 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPRS 261
G ++ G GG + + GG SGG GH + GG + GGH +G R
Sbjct: 54 GGAHASVGGGHASGGGGHASVGGGHASGGGGHAVEGGGHAGGGGGGHGEEEGGHGIG-RG 112
Query: 262 LDMAH 276
M H
Sbjct: 113 GGMVH 117
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = +1
Query: 28 IFICLLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGG 207
+ I LLL T GG G GG + + GG SGG GH GGG
Sbjct: 22 LIITLLLVNCTTVVAKGGGGGAHGGGGVHVSVGGAHASVGGGHASGGGGH----ASVGGG 77
Query: 208 HDFSEAQALGGH 243
H A GGH
Sbjct: 78 H----ASGGGGH 85
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 176 CPWPPEK-SWPPYAKF*PPLWPCSSPATSLEYPPSNP 69
CP PPE WPP K+ PP+ S P +YPP++P
Sbjct: 254 CPPPPEHYPWPPKKKYPPPVEYPSPPYK--KYPPADP 288
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQGHNGG----QNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQA 231
++G GGYS G G GG ++ YG GG+G+ +EGGG+ + +
Sbjct: 102 RSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGS 161
Query: 232 LGG 240
GG
Sbjct: 162 YGG 164
>At2g05510.1 68415.m00583 glycine-rich protein
Length = 127
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 210
G+ GG+ G GH GG +GG + GG G L GGGH
Sbjct: 42 GYHGGHGGHGGG---GHYGGGGHGHGGHNGGGGHG----LDGYGGGH 81
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 222
G+ GG+ G GH GG +GG GG GH GGGH +E
Sbjct: 76 GYGGGHGGHYGGG-GGHYGGGG-GHGGGGHYGGGGH-----HGGGGHGLNE 119
>At2g17870.1 68415.m02070 cold-shock DNA-binding family protein
contains Pfam domains, PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 301
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 73 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
F G +A D G +GG++F GG SGG+G GH + + GG N G
Sbjct: 97 FNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDV--GHFARDCRQSGGGNSG 154
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 82 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
G +A D +G +GG + GG SGG G + G GH + + GG N+G
Sbjct: 167 GEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMC---GGVGHFARDCRQNGGGNVG 220
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 210
G+ GG+ G GH GG +GG +GG GH + GGGH
Sbjct: 42 GYGGGH-----GGHGGHGGGGGHGHGGH--NGGGGHGLDGYGGGGGH 81
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 222
G+ GG + G GG ++ GG + GG GH GGGH +E
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGH-----HGGGGHGLNE 119
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +1
Query: 40 LLLAVATCKAGFEGGY---SNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 210
+LL V+ A + G +E +G+ GG +GG GG GH GGGH
Sbjct: 14 VLLVVSEVSAARQSGMVKPESEETVQPEGYGGGHG-GHGGHGGGGGHGH--GGHNGGGGH 70
Query: 211 DFSEAQALGGH 243
GGH
Sbjct: 71 GLDGYGGGGGH 81
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 803 NWENRRFSGSQNLGTTNGALFNGVFLTGIK 714
NW+ + SG + NG LFNG +L G++
Sbjct: 134 NWKKGKMSGRGVMSWANGDLFNGFWLNGLR 163
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G++GG N G GG N+ GG + GG G Q GGG GG
Sbjct: 56 GYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGR----YQGGGGRYQGGGGRQGGGGS 111
Query: 250 G 252
G
Sbjct: 112 G 112
>At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family
protein identical to proline-rich protein 2 [Arabidopsis
thaliana] gi|7620011|gb|AAF64549
Length = 321
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 595 PKPGSKLPLLTSTLIFP-VHKPIHI*PAP--NPIFKFGVTFKTFIPVKN-TPLNKAPLVV 762
P P K P++ FP +HKPI+ P P PIFK V IP K PL K P
Sbjct: 246 PVPIYKPPVVIPKKTFPPLHKPIYKHPVPIYKPIFKPPV---VVIPKKPCPPLPKFPHFP 302
Query: 763 PKF 771
PK+
Sbjct: 303 PKY 305
>At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to
SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana}
Length = 186
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGGQDF-SGGQGHTIALTQEGGG 207
GG G G GGQ + GGQ + +GGQG+ EG G
Sbjct: 39 GGGGGATGGQGYG-TGGQGYGSGGQGYGTGGQGYGTGTGTEGFG 81
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGGQDF-SGGQGH 177
GGY G G GGQ + GGQ + SGGQG+
Sbjct: 34 GGYGTGGGG---GATGGQGYGTGGQGYGSGGQGY 64
>At3g60320.1 68416.m06742 expressed protein contains Pfam profiles:
PF04782: protein of unknown function (DUF632), PF04783:
protein of unknown function (DUF630)
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = -3
Query: 167 PPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQMNI 27
PP S AKF PP + SPA S YPPS + ASSKQ ++
Sbjct: 76 PPPLSEQSPAKFVPPRF-SPSPAPSSVYPPST---SPSVASSKQPSV 118
>At1g77030.1 68414.m08970 glycine-rich protein
Length = 349
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDF--SGGQGHTIALTQEGGGHDFSEAQALG 237
+ G G G G G ++F GG+DF S +G GG + + G
Sbjct: 207 RGGRGGARGGRGGGARGGRGGSRDFGGGGRDFGSSSDRGGRSGGRDFGGRRGGASTSSRG 266
Query: 238 GHNLGPRSLDMAHPSVETLAVTRTFKQHMIQD 333
G G R + P+++T F + D
Sbjct: 267 GKRGGGRGGGESDPTLDTCTDDSLFHVRLSND 298
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 LLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQ--DFSGGQGHTIALTQEGGGHD 213
L L+ + G Y V GD+QGH ++ G+ F G T +E H+
Sbjct: 255 LSLSSSDYSVGSSINYGGSVKGDKQGHQSFNIYSNQGKMSSFDGSNSDTSDSLEERLSHE 314
Query: 214 FSEAQALGGHNLGP 255
++ H L P
Sbjct: 315 GLRNNSITNHGLPP 328
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 LLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQ--DFSGGQGHTIALTQEGGGHD 213
L L+ + G Y V GD+QGH ++ G+ F G T +E H+
Sbjct: 255 LSLSSSDYSVGSSINYGGSVKGDKQGHQSFNIYSNQGKMSSFDGSNSDTSDSLEERLSHE 314
Query: 214 FSEAQALGGHNLGP 255
++ H L P
Sbjct: 315 GLRNNSITNHGLPP 328
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 650 TSLFTFNLPQTQFLSSELPSKPLFQLKIPR*TKPRWLFPS 769
T+L++ NL T F ++ + LF K+ + PR +FP+
Sbjct: 5 TNLYSLNLRSTFFFTNTITCPTLFTFKLSSVSNPRRVFPN 44
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -3
Query: 173 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQMN 30
P PP S PP PP P SP + PP P + A+S N
Sbjct: 788 PPPPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMAN 835
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 67 AGFEGGYS-NEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGG 240
AG GGY N G G GG N Y G GG G+ + GGG + A +GG
Sbjct: 159 AGGGGGYGGNSSYGGNAGGYGG-NPPYSGNAVGGGGGYG---SNFGGGGGYGVAGGVGG 213
>At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar to
RNA helicases GI:3775995, GI:3775987 from [Arabidopsis
thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 616
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
GGY G G +GG + Y G G G + EG G D S +Q+ G + G
Sbjct: 516 GGYGGSSGGYGGGRSGGSSNRYSGDSDRSGFGSFGMRSPEGYGSDRS-SQSGGRSSFG 572
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 64 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGH 243
++G GGYS G G GG+ GG +SGG G ++ GGG + + GG
Sbjct: 104 RSGGGGGYSG--GGGSYGGGGGRR--EGGGGYSGGGGG--YSSRGGGGGSYGGGRREGGG 157
Query: 244 NLG 252
G
Sbjct: 158 GYG 160
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G GG G+ G+ GG YGG GG+G + E GG GGH
Sbjct: 227 GAHGGGYGSGGGEGGGYGGGAAGGYGGGG-GGGEGGGGSYGGEHGGGSGGGHGGGGGHGG 285
Query: 250 G 252
G
Sbjct: 286 G 286
>At2g40610.1 68415.m05009 expansin, putative (EXP8) similar to
expansin 2 GI:7025493 from [Zinnia elegans];
alpha-expansin gene family, PMID:11641069
Length = 253
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 103 GDEQGHNGGQNFAYGGQDFSGGQG 174
GD+ G GG YGG+D SG G
Sbjct: 25 GDDGGWQGGHATFYGGEDASGTMG 48
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 441 HRDRPHHQRTRSHHHRGRNPLDRQNCDRRNRLDP 340
H HH+R HHH R+ D CD R P
Sbjct: 31 HHSHHHHRRHGVHHHNQRH--DSDGCDPLRRPTP 62
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 179 VCPWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 66
V P PP PP + PP+ P P + + YPP P+
Sbjct: 608 VTPSPP----PPSPLYYPPVTPSPPPPSPVYYPPVTPS 641
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 179 VCPWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 66
V P PP PP + PP+ P P + + YPP P+
Sbjct: 623 VTPSPP----PPSPVYYPPVTPSPPPPSPVYYPPVTPS 656
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 711 NLYSS*KYPVK-QSPVGCSQVLRTGKSSIFPIRKKVLLPLTPS 836
NL P+K ++ +G +L GK P++ ++ LPLTPS
Sbjct: 819 NLKKEDPNPLKVENLIGVEPLLENGKLDTVPMKTELGLPLTPS 861
>At5g40500.1 68418.m04912 expressed protein
Length = 123
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 469 VTIRRAKSRRLLFRWRA*FTAMAGELWRSRGSHFPWEIIQIFPKPGS 609
VT+ RA S + WR E R + SH+P+++I+I P P S
Sbjct: 14 VTMSRASS---MVGWRLQINCRKKEKGRDQ-SHYPYKVIEITPPPKS 56
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 82 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTI--ALTQEGGGHDFSEAQALGGH 243
GYS G G+N G GG + GG G + + GGG+ GG+
Sbjct: 294 GYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGY 349
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 79 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGG 240
GGYS G G+ GG YGG G G+ GGG+ S GG
Sbjct: 309 GGYS---MGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGG 359
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 GGYSNEVAG-DEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 252
GGY + G G+ GG + GG G G+ GGG + GG+ G
Sbjct: 355 GGYGGGMGGAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGG 413
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 492 GFGPPYRDRRPRLGC*NHRDRPHHQRTRSHHHRG 391
G G + RR + RDR HH+ HHHRG
Sbjct: 99 GHGHGHGHRRHGRDHRHGRDRGHHRGHGHHHHRG 132
>At3g25050.1 68416.m03130 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
endoxyloglucan transferase EXGT-A4 GI:5533315 from
[Arabidopsis thaliana]
Length = 290
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 160 SGGQGHTIALTQEGGGHDFSEAQALGGHNLGPRSL 264
+GG LT +GGGHD + + LG +N P +L
Sbjct: 91 TGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTL 125
>At3g19990.1 68416.m02529 expressed protein
Length = 425
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 808 FLIGKIEDFPVLKTWEQPTGLCLTGYF 728
FL I+ + +LK W+ P +CL G F
Sbjct: 54 FLDHLIDIYKILKLWKAPESVCLCGLF 80
>At2g05530.1 68415.m00585 glycine-rich protein
Length = 115
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 34 ICLLLAVATCKAGFEGGYSNEVAGDEQ--GHNGGQNFAYGGQDFSGGQGHTIALTQEGGG 207
+ L++ +G S E +Q G +GG GG ++GG GH GGG
Sbjct: 14 VLLVVTEVAAASGTVKSESGETVQPDQYNGGHGGNGGYNGGGGYNGGGGHNGGGYNGGGG 73
Query: 208 HD 213
++
Sbjct: 74 YN 75
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 173 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQ 36
P PP W P + P P SSPA YPP P + Q
Sbjct: 62 PPPPPPQWGPPSPHYPQGQPYSSPA----YPPHQPPFNAGANGNSQ 103
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 173 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQ 36
P PP W P + P P SSPA YPP P + Q
Sbjct: 62 PPPPPPQWGPPSPHYPQGQPYSSPA----YPPHQPPFNAGANGNSQ 103
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQN--FAYGGQDFSGGQGHTIALTQEG-GGHDFSE 222
G EG S E G G Q F GG GG+G+T Q G GG + +
Sbjct: 13 GGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGRGGRGYGQ 66
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQN--FAYGGQDFSGGQGHTIALTQEG-GGHDFSE 222
G EG S E G G Q F GG GG+G+T Q G GG + +
Sbjct: 13 GGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGRGGRGYGQ 66
>At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 480
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 170 WP-PEKSWPPYAKF*PPLWPCSSPATSLEYPP-SNPALQVATASS 42
WP P+ + P PPL P +SP+ SL++P N QV SS
Sbjct: 331 WPNPQNNLQPENV--PPLVPATSPSMSLDFPNFQNTPPQVLVTSS 373
>At3g08790.1 68416.m01021 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 607
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 128 PPLWPCSSPATSLEYPPSNP 69
PP W SP++S +Y P++P
Sbjct: 442 PPPWEAQSPSSSPQYSPTHP 461
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 70 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 249
G +GG N+ G G NGG G++ GG G GGG + + G +
Sbjct: 277 GAKGGPGNQNQGG--GKNGGGGHPQDGKNGGGGGGPNAGKKGNGGGGPMAGGVSGGFRPM 334
Query: 250 ---GPRSLDM 270
GP+++ M
Sbjct: 335 GGGGPQNMSM 344
>At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 159
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 100 AGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPR 258
+G GH GG ++ GG GG G++ GGG +S GG G R
Sbjct: 89 SGGGGGHRGGGSYGGGGGRREGGGGYS------GGGGGYSSRGGGGGSYGGGR 135
>At2g19000.1 68415.m02217 expressed protein
Length = 125
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 13 KSNMKIFICLLLAVATCKAG---FEGGYSNEVAGDEQG-HNGGQNFAYGGQDFSGGQGHT 180
KS + F+ +++ V+ +A ++ G S E+ G + G H+G F+ G +GG G +
Sbjct: 4 KSILLPFLLVIIFVSASQASRQLWDSGIS-EMFGSKSGFHHGFSGFS-GSSGGAGGAGGS 61
Query: 181 IA-LTQEGGGHDFSEAQALGGHNL 249
+ GG H S A G L
Sbjct: 62 FGDMMNAGGAHTCSAQGACSGKKL 85
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -3
Query: 173 PWPPEKSWPPYAKF*PPLWP--CSSPATSLEY---PPSNPALQV 57
P PP KS PP + PPL P SSP T PP P+ V
Sbjct: 654 PPPPVKSPPPPPVYSPPLLPPKMSSPPTQTPVNSPPPRTPSQTV 697
>At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein
similar to dopamine-responsive protein [Homo sapiens]
GI:13177623; contains Pfam profile PF02492: Cobalamin
synthesis protein/P47K
Length = 301
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 292 LAVTRTFKQHMIQDTNWVKAIS 357
L++ + + H++QDTNW+K S
Sbjct: 277 LSIQNSDQMHILQDTNWMKKFS 298
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,394,939
Number of Sequences: 28952
Number of extensions: 509930
Number of successful extensions: 2101
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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