Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30696
(887 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 36 0.044
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 33 0.31
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 30 2.9
SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 3.8
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 29 5.0
SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_18387| Best HMM Match : Utp12 (HMM E-Value=1.1e-06) 29 6.6
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 6.6
SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4) 28 8.8
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 8.8
SB_59564| Best HMM Match : Vicilin_N (HMM E-Value=4.8) 28 8.8
SB_41447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 8.9
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 35.9 bits (79), Expect = 0.044
Identities = 18/83 (21%), Positives = 41/83 (49%)
Frame = +1
Query: 10 LLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSV 189
+L+ +K ++ K+R KL T+L+ LQ ++ E+ K +Q+N+ +D +
Sbjct: 161 ILEIQKKLDVTTIAVKDRETTILKLETALQDLQVKFDSNRTELVKYQNQVNADLKRIDHL 220
Query: 190 TKNYEYAQKDICEHISVMDNLLI 258
+ K + EH+ ++ + +
Sbjct: 221 EHELMISTKTVEEHVITINEMKV 243
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 130 LEIEKLTSQINSLKTDLDSVTKNYEYAQKDICEHISVMDNLLIYVIIIKSD 282
L IE L ++ SL+ +LD++ K+ E+A++ E+ D L +I ++ +
Sbjct: 1829 LVIEDLRAEKTSLEIELDNLKKDLEFAKQTGVEYTKENDTLQKEIIELREE 1879
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +1
Query: 43 KTICKERNALRTKLNTSLEKLQYVHHNHELE-----IEKLTSQINSLKTDLDSVTKNYEY 207
K + ++A T++ T + L+ H+ ++E E+L +++ S K LD VT+NY
Sbjct: 77 KEVACLKDAFSTEMQTEKQSLE-AKHSRDIEGMTKINEELKAKLCSQKQSLDEVTQNYGR 135
Query: 208 AQKDIC 225
Q+++C
Sbjct: 136 LQREMC 141
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 RKSINYMKTICKERNALRTKLNTSLEKLQY--VHHNHELEIEKLTSQINSLKTDLDSV 189
+K + K I K++N +R +L T L +LQ H + E E+E ++I LKT+++ +
Sbjct: 331 KKVLELEKDISKKKNEIR-RLRTELSQLQENSKHKHFEKELEGRKAEIKQLKTEINQL 387
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 40 MKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLD 183
M+T +E+N+L +++N+ ++L + H EIEK K+ LD
Sbjct: 1296 MRTFAEEKNSLSSQVNSLEQELANLKDKHSKEIEKFAKGAGENKSLLD 1343
>SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +1
Query: 16 KSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTK 195
K R+ + +K +E L+ + + HE +++ + +IN L DLD +
Sbjct: 4 KVREKMQGIKNKIEEAEEREAMAKMELKDAEERAYQHESDLDSMQKRINLLSEDLDKTLE 63
Query: 196 NYE 204
YE
Sbjct: 64 AYE 66
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 40 MKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLD 183
++T+ KE + K + L+ HE IE+L S+I +K DL+
Sbjct: 74 LETVRKENDTEMEKQTNENDTLKETITGHEETIEQLKSEIEEIKADLE 121
>SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 55 KERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKDI 222
KE NA +L SLE+ + + EKL ++I L+ D +TK E + + I
Sbjct: 112 KEENARVVELEGSLEQRKKEADGYRERNEKLAAEIEKLQQGKDHLTKECEASSEKI 167
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 34 NYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQ 213
N+MK + L+ K+N EK Q + +L +++ ++ DLD TK+ +
Sbjct: 2163 NHMKQEVEHERMLKDKINREKEKFQ-------ADKYRLEQELDQVQEDLDRATKDKHKLE 2215
Query: 214 KDICE 228
+D+ E
Sbjct: 2216 QDLLE 2220
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/69 (23%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 43 KTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKD- 219
+ I + +LR ++ L + + ++ ++ ++ L ++I +LK +DS+ K E Q+D
Sbjct: 3829 QNILNKDRSLR-RVQQELAEERSLNDGNKTQLHDLETEIRNLKLKIDSLEKEVESLQEDL 3887
Query: 220 ICEHISVMD 246
+ H + +D
Sbjct: 3888 VLSHTAYLD 3896
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 52 CKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKD---I 222
C ++ K + +L+ H + E+EK+ ++ +L+ +L+ + K Y+ A ++ +
Sbjct: 1325 CSVAREIKPK-REKVARLERNFHLSKRELEKIEKELKALEEELERLGKQYDDAMREKSSL 1383
Query: 223 CEHISVMDNLLI 258
E +M+ LI
Sbjct: 1384 QEEAEIMERRLI 1395
>SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 127 ELEIEKLTSQINSLKTDLDSVTKNYEYAQ 213
E+E E L S++N++KTDL S+ + + A+
Sbjct: 19 EIENESLKSEVNTMKTDLSSMHSDMKEAR 47
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 127 ELEIEKLTSQINSLKTDLDSVTKNYEYAQ 213
E+E E L S++N++KTDL S+ + + A+
Sbjct: 185 EIENESLKSEVNTMKTDLSSMHSDMKEAR 213
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +1
Query: 7 QLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLD 183
Q L +KS ++ I KE L+ K+ + E+L+ + + E+LTSQ+ L+ DLD
Sbjct: 2311 QFLLDKKS-KKLERITKESKDLKEKVTSLEEELRLSNK----QSERLTSQVQRLERDLD 2364
>SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 25 KSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYE 204
K+ Y K + T++ +S+ +++ LEI T++I L+ +DS+ N E
Sbjct: 348 KASQYTKKMTDRMRRRATEMQSSVAEVENEISRDVLEISNTTTRIRLLQEVMDSL--NDE 405
Query: 205 YAQKDICEHISVMDNLLI--YVIIIKSDLNL*HYNMLI 312
QK+ E IS ++N ++ II + + YN I
Sbjct: 406 IHQKN--EDISKIENEIVKCNAIIERKQSTIDQYNKRI 441
>SB_18387| Best HMM Match : Utp12 (HMM E-Value=1.1e-06)
Length = 457
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 88 TSLEKLQYVHHNHELEIEKLTSQINSLKT 174
TS + +HHN + EKL+S ++SL+T
Sbjct: 391 TSQARGSMIHHNQIVSTEKLSSVVDSLRT 419
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 7 QLLKSRKSINYMKTICKERNALRTKLNTSLE-------KLQYVHHNHELEIEKLTSQINS 165
+L + +++N +T R++LN+ LE K Q + N E + +K+ QIN
Sbjct: 1432 KLQEMEEALNTAQTKAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINE 1491
Query: 166 LKTDLDSVTKNYEYAQKD 219
+ L+ V + + +QK+
Sbjct: 1492 WRVKLEEVQADLDNSQKE 1509
>SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4)
Length = 89
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +1
Query: 88 TSLEKLQYVHHN---HELEIEKLTSQINSLKTDLDSVTKNYE-YAQKDICEHISVMDNLL 255
+++E + ++HH HE E+EKL ++ +LK + +NYE A+ + +++DN
Sbjct: 4 SAIEYVSFMHHQRKKHEEELEKLRKEVLALKI----MKQNYEQIARAHADQFKAILDNQF 59
Query: 256 I 258
+
Sbjct: 60 V 60
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +1
Query: 55 KERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKDICEHI 234
KERN L+ K E+ + +E IEK ++ LK +++++ + +K + + I
Sbjct: 1201 KERNKLKQKYEELTEEDEEEDAIYEETIEKQNKRLQELKEEVENLKRKNGIEEKRLRDDI 1260
Query: 235 SVMDNLL 255
+ + L
Sbjct: 1261 NKLSETL 1267
>SB_59564| Best HMM Match : Vicilin_N (HMM E-Value=4.8)
Length = 170
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 121 NHELEIEKLTSQINSLKTDLDSVTKNYEYAQKDICEHISVMDNLLIYVIIIKSDLNL*HY 300
+HE+ + K+ QI + D S+ K+Y +K +C+ + +M +L + I H
Sbjct: 22 DHEILLRKM--QILGISHDALSLIKSYLSGRKQVCQLLELMQRMLNAMCIQAPTKRTPHT 79
Query: 301 NMLIASATALYQ 336
+A+ A Q
Sbjct: 80 RQYLAARLAYPQ 91
>SB_41447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +1
Query: 55 KERNALRTKLNTSL-EKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKN----YEYAQKD 219
+E++ LR ++ + +K + + E+ +EKL + + + VT+ Y D
Sbjct: 450 EEKHKLRMRMEEIISDKSEILRCLVEIGVEKLLRDLTTYFLSEELVTQEQLSYYTDTSPD 509
Query: 220 ICEHISV---MDNLLIYVIIIKSDLNL*HYNMLIASATALYQVLHY 348
+ +S+ M N+L ++ KS +++ H N+ + + ++L H+
Sbjct: 510 LVSRVSMVGKMHNILDLILTTKSVIDVGHSNLQLLTQSSLTYYKHH 555
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 ERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDSVTKNYEYAQKDI 222
E N L T L + H LE+ K + SL+ +LD+ + YE ++
Sbjct: 57 ESNETIRTLETELAVSKEKHRTCALEVSKRDETVLSLQAELDATQQEYESVTSEL 111
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 7 QLLKSRKSINYMKTICKERNALRTKLNTSLEKLQYVHHNHELEIEKLTSQINSLKTDLDS 186
+L + RK + ++ ++ N + L SL K + E+E EKL + LK +L+
Sbjct: 1501 ELNRLRKELADVRAQREKLNVEKNDLKVSLHKTKSHLAEEEMENEKLVKENEILKVELEQ 1560
Query: 187 VTK 195
+ K
Sbjct: 1561 LKK 1563
>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 23.8 bits (49), Expect(2) = 8.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 205 YAQKDICEHISVMDNLL 255
+ + DIC+ I V DNL+
Sbjct: 1373 FTENDICDAIPVFDNLI 1389
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 5/17 (29%), Positives = 14/17 (82%)
Frame = +1
Query: 175 DLDSVTKNYEYAQKDIC 225
D++ +++N +YA +++C
Sbjct: 1324 DIEEISENVQYALRNVC 1340
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,305,831
Number of Sequences: 59808
Number of extensions: 675246
Number of successful extensions: 1752
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -