Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30695
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 617 SQYRFSNSYRVHKEQS 570
           SQY F+N+  VH+ Q+
Sbjct: 101 SQYNFTNNVLVHRSQN 116


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 390 KICIRSFKHYLLFTVTWIVLFL 325
           ++C   +  ++L  V WIVL L
Sbjct: 292 EVCNAGYLPFILLQVAWIVLHL 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 295  PSHYPSQSYPQEQNYPSY 348
            P H PS S  Q+   PSY
Sbjct: 1157 PGHKPSTSSWQKPTKPSY 1174


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 322 GMTGMDSDWELG*GS 278
           G  G+D DWE   GS
Sbjct: 202 GFDGLDIDWEYPKGS 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,445
Number of Sequences: 336
Number of extensions: 2764
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)