Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30695
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475           29   4.7  
02_01_0004 + 33108-33752                                               28   8.3  

>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
          Length = 634

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 254 KKELEWDSKLELGWGSKMGLGW 189
           KK LEW  +L++  GS  GL W
Sbjct: 415 KKALEWPLRLKIAIGSAKGLAW 436


>02_01_0004 + 33108-33752
          Length = 214

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 28  PTPPPVPAAIQAALESKCQRGSR 96
           PTP P P+AI   L+ + Q GSR
Sbjct: 186 PTPTPSPSAIVGVLQPQDQAGSR 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,337
Number of Sequences: 37544
Number of extensions: 294400
Number of successful extensions: 1117
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)