Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30693
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.52 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.8  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.4  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 348 YFTILQAYEYIEASF--TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNTFLK 521
           Y  +L  + +    F  TI  R  G  +      + + +++  L ++ C ++H+ N  +K
Sbjct: 22  YLKVLVTFAHFICLFPITINIRKNGLNYNFTKKCYFLRMVLIDLLIVGCILKHIFNILMK 81

Query: 522 IITLD 536
            +TL+
Sbjct: 82  NVTLN 86


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 320 IIFNYFIRILFYYFTS 367
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 320 IIFNYFIRILFYYFTS 367
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 360 LQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLN 506
           LQ  +Y+E +   + R+Y S  FI+       V    L L    I HL+
Sbjct: 59  LQEMKYLERAIKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLH 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,177
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)