Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30693
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   2.7  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.7  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.7  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    28   6.2  
AC006730-11|ABO16462.1|  327|Caenorhabditis elegans Hypothetical...    28   6.2  
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 187 PSRITPFNPFQIPLLNTIIL 246
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 187 PSRITPFNPFQIPLLNTIIL 246
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 187 PSRITPFNPFQIPLLNTIIL 246
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 312 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIAT-GFHGIHVIIGTLFLLIC 488
           +Q L L  LLG+       Y  +E  ++  D  Y     + T GF  +H  +GT+  ++C
Sbjct: 292 RQLLVLVFLLGYMTISACVYTILEPMWSFLDSFYFCLVSLLTVGFGDLHP-VGTVEYMLC 350

Query: 489 YI 494
            I
Sbjct: 351 SI 352


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 281 LIDRK*LLTNKTKIIFNYFIRILFYYFTSI 370
           LID + LL NKT   F YF    F YFT++
Sbjct: 619 LIDYEPLLFNKTTNRFEYFDSRGFLYFTAV 648


>AC006730-11|ABO16462.1|  327|Caenorhabditis elegans Hypothetical
           protein Y27F2A.11 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 420 TFFIATGFHGIHVIIGTLFLLICYIRHLNNTFLKIIT 530
           +F I  GF+G  VI+ T  +L C +  L N  + ++T
Sbjct: 277 SFVILLGFNGSQVIVETFLVLAC-LHSLINVLVLVVT 312


>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
           protein T05C3.2 protein.
          Length = 1733

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +3

Query: 444 HGIHVIIGTLFLLICYIRHLNNTFLKIITLDLKLQLDIGHFGRCSMIISLHFHLLDEGI 620
           HGI  +       +CYIRH+NN  L  +    K  +DI H    S    L  +L DE +
Sbjct: 303 HGILKVKNPNEHCLCYIRHINNIALSQMKTASKF-VDIAHNHVNSEAQKLLANLRDERV 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,608,747
Number of Sequences: 27780
Number of extensions: 206671
Number of successful extensions: 574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)