Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30692
(848 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 194 1e-51
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 142 4e-36
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 140 2e-35
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 26 0.33
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.76
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 25 1.00
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 24 1.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.3
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 23 2.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 4.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 4.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 5.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 5.3
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 9.3
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 9.3
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 194 bits (472), Expect = 1e-51
Identities = 83/111 (74%), Positives = 88/111 (79%)
Frame = +1
Query: 235 PGRFVLRIEKQTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLF 414
P I+KQTCDWKD+VKNCKLKNKERK+KPLL T+EPLC DG LACGD CIERGLF
Sbjct: 76 PAGLYFDIDKQTCDWKDSVKNCKLKNKERKVKPLLITDEPLCPDGSLACGDGNCIERGLF 135
Query: 415 CNGEKDCGDGSDENSCDIDNDPNRAPPCDFLECVLPDCFCFRGRQQ*FPGD 567
CNGEKDC DGSDEN+CDIDNDPNRAPPCD CVLPDCFC PGD
Sbjct: 136 CNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTT-IPGD 185
Score = 110 bits (264), Expect = 2e-26
Identities = 49/61 (80%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 RRQADETA-KIDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLF 250
++QA+ETA K ++S E ELCKDKDAGEWFRLVAGEGDNCRDVIQCT+SG+QAIRCPAGL+
Sbjct: 21 QQQAEETAPKKEDSFEVELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPAGLY 80
Query: 251 F 253
F
Sbjct: 81 F 81
Score = 32.7 bits (71), Expect = 0.004
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 539 EDGNSDSPGTLPARNVPQMIHLSTFDECRFNN 634
EDG + PG LP+++VPQMI + TFD+ NN
Sbjct: 177 EDGTT-IPGDLPSKDVPQMITI-TFDDAINNN 206
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 142 bits (343), Expect = 4e-36
Identities = 58/104 (55%), Positives = 71/104 (68%)
Frame = +1
Query: 223 SYTLPGRFVLRIEKQTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIE 402
S P IE+QTCDWK V NC + K RK+ P T+EP+C DG L+CG+ CI+
Sbjct: 71 SVRCPVGLAFDIERQTCDWKTKVNNCDVIEKPRKVLPNFKTDEPICPDGKLSCGNGECID 130
Query: 403 RGLFCNGEKDCGDGSDENSCDIDNDPNRAPPCDFLECVLPDCFC 534
+ LFCNG+ DC D SDENSC ++ DPNRAP CD +CVLPDCFC
Sbjct: 131 KELFCNGKPDCKDESDENSCTVETDPNRAPDCDPTQCVLPDCFC 174
Score = 47.6 bits (108), Expect = 1e-07
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Frame = +2
Query: 83 ADETAKIDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCT-------ASGIQAIRCPA 241
A E DE+ ELC+++ A E+FRL EGD CRDV++C A+ + ++RCP
Sbjct: 19 AQEEEGGDEATADELCENRPADEYFRLTT-EGD-CRDVVRCDKNSDNNGATRLASVRCPV 76
Query: 242 GLFF 253
GL F
Sbjct: 77 GLAF 80
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 560 PGTLPARNVPQMIHLS 607
PG L NVPQMI L+
Sbjct: 182 PGQLEPANVPQMITLT 197
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 140 bits (338), Expect = 2e-35
Identities = 58/107 (54%), Positives = 70/107 (65%)
Frame = +1
Query: 214 GNTSYTLPGRFVLRIEKQTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDST 393
G T P I+KQTCDWK V NC K RK+ P T+EP+C DG L+CG+
Sbjct: 61 GLKQITCPSGLAFDIDKQTCDWKGKVNNCDKLEKPRKVLPNFKTDEPICPDGKLSCGNGE 120
Query: 394 CIERGLFCNGEKDCGDGSDENSCDIDNDPNRAPPCDFLECVLPDCFC 534
CI++ LFCNG+ DC D SDENSC ++ DPNRA CD +CVLPDCFC
Sbjct: 121 CIDKELFCNGKPDCKDESDENSCTVETDPNRALDCDPTQCVLPDCFC 167
Score = 60.1 bits (139), Expect = 2e-11
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +2
Query: 83 ADETAKIDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLFF 253
A E DE+ ELC+++ A E+FRL EGD CRDV++CT SG++ I CP+GL F
Sbjct: 19 AQEEEGGDEATADELCENRPADEYFRLTT-EGD-CRDVVRCTKSGLKQITCPSGLAF 73
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 560 PGTLPARNVPQMIHLS 607
PG L NVPQMI L+
Sbjct: 175 PGQLEPANVPQMITLT 190
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 158 RLVAGEGDNCRDVIQCTASGIQAIRCPAGLFF 253
RL + NC C +Q CP GLF+
Sbjct: 2240 RLFVADDTNCAQYYLCNQGQLQLQVCPNGLFW 2271
Score = 23.4 bits (48), Expect = 2.3
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +1
Query: 259 EKQTCDWKDAVKNCKLKNKERKIK-PLLYTEEP--LCQDGFLACGDSTCIERGLFCNGEK 429
E+ CDWK VK K +K + P + +P C + A C R L C K
Sbjct: 1243 EEHMCDWKYKVKCVGRKQLAQKYQLPKMGGPQPYSACSENAFAAYPGDC-TRYLHCLWGK 1301
Query: 430 ----DCGDGSD-ENSCDIDNDPNRAPPCD 501
+C G +N+ +I + P +A CD
Sbjct: 1302 YEVFNCAPGLHWDNNKNICDWPEKA-TCD 1329
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.0 bits (52), Expect = 0.76
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 418 NGEKDCGDGSDENSCD--IDNDPNRAPPCDFLECVLP 522
NG D S + S D + PNR P DF VLP
Sbjct: 239 NGPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQVLP 275
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 24.6 bits (51), Expect = 1.00
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 430 DCGDGSDENSCDIDN-DPNRAPPCDFLECVLPD 525
DC G++ +C+ID + + PC L+ + D
Sbjct: 402 DCPSGTNGTNCEIDTINECDSNPCKHLDAICQD 434
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +1
Query: 235 PGRFVLRIEKQTCDWKDAVKNC 300
P V ++ CDW + V+ C
Sbjct: 948 PSNLVFNPDQNVCDWPENVEGC 969
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A K P T
Sbjct: 228 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTT 267
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A K P T
Sbjct: 228 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTT 267
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 164 VAGEGDNCRDVIQCTASGIQAIRCPAGLFFVLRNR 268
V G+ C +C + CP GL F +NR
Sbjct: 35 VVGDETYCDRYWECVNGQQELYDCPNGLVFAGKNR 69
Score = 23.0 bits (47), Expect = 3.1
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +2
Query: 86 DETAKIDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLFFVLRN 265
D +D + LC D G G +C QC + RCPA L F R+
Sbjct: 142 DWPENVDGCQKHPLCNDDPNGN-----VPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRS 196
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -3
Query: 771 GQE*LGVTLVGETKIRWPLIIRNPFRGFLPLS 676
G + +T + + WPL+ NP +P+S
Sbjct: 218 GLDIASITAQASSFVVWPLVENNPTLYLIPVS 249
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -3
Query: 771 GQE*LGVTLVGETKIRWPLIIRNPFRGFLPLS 676
G + +T + + WPL+ NP +P+S
Sbjct: 218 GLDIASITAQASSFVVWPLVENNPTLYLIPVS 249
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 262 SQYEEQTGRATYSLY 218
SQ+E + GR TY+ Y
Sbjct: 238 SQFERKRGRQTYTRY 252
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 262 SQYEEQTGRATYSLY 218
SQ+E + GR TY+ Y
Sbjct: 240 SQFERKRGRQTYTRY 254
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 259 EKQTCDWKDAVKNCK 303
E + C W D V CK
Sbjct: 133 EARVCMWADQVPECK 147
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/34 (26%), Positives = 13/34 (38%)
Frame = +2
Query: 179 DNCRDVIQCTASGIQAIRCPAGLFFVLRNRPAIG 280
D+CR C + CP G F + + G
Sbjct: 176 DDCRKYYICLEGTAREYGCPIGTVFKIGDADGTG 209
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 259 EKQTCDWKDAVKNCK 303
E + C W D V CK
Sbjct: 133 EARVCMWADQVPECK 147
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/34 (26%), Positives = 13/34 (38%)
Frame = +2
Query: 179 DNCRDVIQCTASGIQAIRCPAGLFFVLRNRPAIG 280
D+CR C + CP G F + + G
Sbjct: 176 DDCRKYYICLEGTAREYGCPIGTVFKIGDADGTG 209
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,047
Number of Sequences: 336
Number of extensions: 5212
Number of successful extensions: 37
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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