Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30692
(848 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 26 0.50
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 23 4.7
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.2
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 22 6.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 8.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 8.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 8.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 8.2
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 25.8 bits (54), Expect = 0.50
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 481 LGRCQYHKNFHQIHRHSPFRRYRKDRVQCK*SRRKRGSHLDRVVLQ 344
L + HK+ + +HS + RK+ Q + R++ H DRV Q
Sbjct: 45 LNSLRNHKSIYH-RQHSKNEQQRKEMEQMREREREQREHSDRVTSQ 89
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 22.6 bits (46), Expect = 4.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 411 KTAFNASRVAASEEAILTEWFFSVQERLYFTL 316
+TAF ++ A E T + SV ERL L
Sbjct: 12 RTAFTYEQLVALENKFKTTRYLSVCERLNLAL 43
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 262 SQYEEQTGRATYSLY 218
SQ+E + GR TY+ Y
Sbjct: 266 SQFERKRGRQTYTRY 280
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 22.2 bits (45), Expect = 6.2
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +1
Query: 409 LFCNGEKD----CGDGSDENSCDIDNDPNRAPPCDFL 507
L NG+ D C G + + DI++DP A +L
Sbjct: 29 LLLNGKXDLFARCMGGINSRNMDIEHDPGLAAVLQYL 65
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A P T
Sbjct: 211 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A P T
Sbjct: 211 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A P T
Sbjct: 211 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTT 250
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 8.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 268 SVSQYEEQTGRATYSLYSRGSTLDDVATVVALAG 167
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 8.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 268 SVSQYEEQTGRATYSLYSRGSTLDDVATVVALAG 167
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 582 MFLK*FTYPPSMNADLTINKHLDLYQRDFLNGKAAKNPGT 701
M L FT PP LT+ + L FLN A P T
Sbjct: 279 MALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTT 318
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 8.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 268 SVSQYEEQTGRATYSLYSRGSTLDDVATVVALAG 167
SVS R+T +++ S +DD T V + G
Sbjct: 253 SVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGG 286
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 253 RIEKQTCDWKDAVKNCKLKNKERKIKPLL 339
++EK ++K +K +L K+RKI ++
Sbjct: 431 KLEKHLIEYKKMLKIKRLFGKDRKIMDMV 459
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,390
Number of Sequences: 438
Number of extensions: 6792
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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