Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30691
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   0.79 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   7.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 187 GRQAGDHRDHRPRRQRTGDPRNPNLGAPGSE 279
           G+Q G   D R ++ RTG+ R  +  +  +E
Sbjct: 23  GQQHGPQSDSRNQQLRTGEKRKRSTSSQSTE 53


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 190 RQAGDHRDHRPR 225
           RQ  DHRD  PR
Sbjct: 249 RQCDDHRDRPPR 260


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 18  RPRACRPPRLETKTGLKVVNST 83
           RP   RPP   +  G K V +T
Sbjct: 409 RPEWARPPSTPSADGSKPVQTT 430


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 383 TPAPDNSFSPAMEFCVREGN 324
           T     +F P  E CV EGN
Sbjct: 470 TITESKNFEPWREKCVVEGN 489


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,141
Number of Sequences: 336
Number of extensions: 1628
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)