Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30691
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    23   3.8  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        22   6.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   8.9  

>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 142 HPRECEQRYEVE*PSHHDSRVLFTTF 65
           +P +  QR +V    H DS VLF  F
Sbjct: 88  YPSDVVQRAKVNAALHFDSGVLFARF 113


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 RNPNLGAPGSELSERNKRTIGI 312
           RNP LG  G+   + N  +IG+
Sbjct: 30  RNPRLGIQGTHGRQCNDTSIGV 51


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 182  GQAGGSVPGQGPRAPPRV-RTTL 117
            G  G    G+ P+APP+  RTTL
Sbjct: 1226 GHDGPVSAGKPPQAPPKAKRTTL 1248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,970
Number of Sequences: 2352
Number of extensions: 7132
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)