Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30691
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074127-1|BAB84953.1| 383|Homo sapiens FLJ00199 protein protein. 36 0.059
BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembr... 34 0.14
BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembr... 34 0.14
AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembr... 34 0.14
AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembr... 34 0.14
AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembr... 34 0.14
AB067511-1|BAB67817.1| 613|Homo sapiens KIAA1924 protein protein. 34 0.14
AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens ... 33 0.24
BC028156-1|AAH28156.1| 447|Homo sapiens chromosome 19 open read... 32 0.55
BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open readi... 30 2.9
BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open readi... 30 2.9
AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens ... 30 2.9
BC110356-1|AAI10357.1| 271|Homo sapiens INPP5E protein protein. 29 3.9
BC028032-1|AAH28032.1| 644|Homo sapiens inositol polyphosphate-... 29 3.9
AL592301-16|CAI13947.1| 644|Homo sapiens inositol polyphosphate... 29 3.9
AF187891-1|AAF81404.1| 644|Homo sapiens phosphatidylinositol po... 29 3.9
U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein. 29 5.1
U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein. 29 5.1
U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced LIM... 29 5.1
U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein. 29 5.1
D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein. 29 5.1
AC005057-3|AAS07438.1| 596|Homo sapiens unknown protein. 29 5.1
AB209557-1|BAD92794.1| 365|Homo sapiens LIM domain kinase 1 iso... 29 5.1
AB103105-1|BAC78803.1| 113|Homo sapiens Pex26pT35insC/del223-27... 29 5.1
AB103104-1|BAC78802.1| 113|Homo sapiens Pex26pT35insC protein. 29 5.1
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 29 6.8
BC052560-1|AAH52560.1| 227|Homo sapiens LOC387763 protein protein. 29 6.8
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 29 6.8
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 29 6.8
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 29 6.8
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 29 6.8
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 29 6.8
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 29 6.8
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 28 8.9
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 28 8.9
>AK074127-1|BAB84953.1| 383|Homo sapiens FLJ00199 protein protein.
Length = 383
Score = 35.5 bits (78), Expect = 0.059
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +1
Query: 124 VRTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPGSELS 285
+ R A G C PA PC AG R H PRRQ PR AP L+
Sbjct: 324 ITARVTAEGVCREAGVPAAPCLPPAGGVRLHLPRRQHAARPREDPHAAPDRGLA 377
>BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
>BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
>AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
>AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
>AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
>AB067511-1|BAB67817.1| 613|Homo sapiens KIAA1924 protein protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.14
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -2
Query: 305 MVRLFLSLSSEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAP 138
M R L+ P P G+ GS V R + P R QAG +PG PRAP
Sbjct: 9 MARGSARLAGVPRIPGSGVPGSRVGGRSAQGPRLGPEARVPAQAGSRLPGAHPRAP 64
>AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ30323 fis, clone BRACE2007109, highly similar to
Extensin-like protein NG5. ).
Length = 306
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 EKVTLPHSVVRTRGGA-RGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
EK LP SV T P P EPPA P H H ++G P LGA G
Sbjct: 4 EKSGLPDSVPHTSPPPFNAPQPPAEPPAPPPQAAPSSHHHHHHYYHQSGTATLPRLGAGG 63
>BC028156-1|AAH28156.1| 447|Homo sapiens chromosome 19 open reading
frame 26 protein.
Length = 447
Score = 32.3 bits (70), Expect = 0.55
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 133 RGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGA 267
RGG GPCP + PP P R G P PR GA
Sbjct: 388 RGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTGA 432
>BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 190 RQAGDHRDHRPRRQRTGD-PRN-PNLGAPGSELSERNKRTIGILRQLFPSLTQN 345
R+ G R PRR+RT PR P G PG L R+ +LR +P+L ++
Sbjct: 87 RRCGRPRRRDPRRRRTPALPRPWPGRGGPGRSLLHRHLFIQQLLRTCWPALPRD 140
>BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 190 RQAGDHRDHRPRRQRTGD-PRN-PNLGAPGSELSERNKRTIGILRQLFPSLTQN 345
R+ G R PRR+RT PR P G PG L R+ +LR +P+L ++
Sbjct: 87 RRCGRPRRRDPRRRRTPALPRPWPGRGGPGRSLLHRHLFIQQLLRTCWPALPRD 140
>AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ30277 fis, clone BRACE2002752. ).
Length = 200
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 190 RQAGDHRDHRPRRQRTGD-PRN-PNLGAPGSELSERNKRTIGILRQLFPSLTQN 345
R+ G R PRR+RT PR P G PG L R+ +LR +P+L ++
Sbjct: 87 RRCGRPRRRDPRRRRTPALPRPWPGRGGPGRSLLHRHLFIQQLLRTCWPALPRD 140
>BC110356-1|AAI10357.1| 271|Homo sapiens INPP5E protein protein.
Length = 271
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNP 255
PE + LP + R G+ PG+E PA C A + P R PR P
Sbjct: 18 PEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPP 75
>BC028032-1|AAH28032.1| 644|Homo sapiens inositol
polyphosphate-5-phosphatase, 72 kDa protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNP 255
PE + LP + R G+ PG+E PA C A + P R PR P
Sbjct: 18 PEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPP 75
>AL592301-16|CAI13947.1| 644|Homo sapiens inositol
polyphosphate-5-phosphatase, 72 kDa protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNP 255
PE + LP + R G+ PG+E PA C A + P R PR P
Sbjct: 18 PEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPP 75
>AF187891-1|AAF81404.1| 644|Homo sapiens phosphatidylinositol
polyphosphate 5-phosphatase type IV protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNP 255
PE + LP + R G+ PG+E PA C A + P R PR P
Sbjct: 18 PEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPP 75
>U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein.
Length = 633
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 237 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 295
Query: 274 SELSER 291
S S+R
Sbjct: 296 SPASQR 301
>U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein.
Length = 647
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 251 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 309
Query: 274 SELSER 291
S S+R
Sbjct: 310 SPASQR 315
>U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced
LIM-kinase1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 237 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 295
Query: 274 SELSER 291
S S+R
Sbjct: 296 SPASQR 301
>U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein.
Length = 647
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 251 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 309
Query: 274 SELSER 291
S S+R
Sbjct: 310 SPASQR 315
>D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein.
Length = 647
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 251 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 309
Query: 274 SELSER 291
S S+R
Sbjct: 310 SPASQR 315
>AC005057-3|AAS07438.1| 596|Homo sapiens unknown protein.
Length = 596
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 200 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 258
Query: 274 SELSER 291
S S+R
Sbjct: 259 SPASQR 264
>AB209557-1|BAD92794.1| 365|Homo sapiens LIM domain kinase 1
isoform 1 variant protein.
Length = 365
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 KVTLPHSVVRTRGGARGP--CPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPG 273
++TL H T G GP P + P P G +AG +P + R+P G+ G
Sbjct: 146 QLTLEHDPHDTLGHGLGPETSPLSSPAYTPSG-EAGSSARQKPVLRSCSIDRSPGAGSLG 204
Query: 274 SELSER 291
S S+R
Sbjct: 205 SPASQR 210
>AB103105-1|BAC78803.1| 113|Homo sapiens Pex26pT35insC/del223-271
protein.
Length = 113
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -2
Query: 281 SSEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAP 138
SS AP G RG+P + R G A R GG PG P P
Sbjct: 5 SSTSAAPPQGARGTPAQQRAGARGPGPGAGRGPSGGGGRPPGGAPGLP 52
>AB103104-1|BAC78802.1| 113|Homo sapiens Pex26pT35insC protein.
Length = 113
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -2
Query: 281 SSEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAP 138
SS AP G RG+P + R G A R GG PG P P
Sbjct: 5 SSTSAAPPQGARGTPAQQRAGARGPGPGAGRGPSGGGGRPPGGAPGLP 52
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1163 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1222
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1223 SRPKTPNRASP 1233
>BC052560-1|AAH52560.1| 227|Homo sapiens LOC387763 protein protein.
Length = 227
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +1
Query: 127 RTRGGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPGSELS 285
R R PCP T PPA P R A R RR D +P G P + S
Sbjct: 29 RRNSAPRAPCPPTGPPARPPSRGA-PARAREGRRHPAAD-LDPPPGEPPAAAS 79
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1147 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1206
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1207 SRPKTPNRASP 1217
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1147 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1206
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1207 SRPKTPNRASP 1217
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1085 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1144
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1145 SRPKTPNRASP 1155
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1147 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1206
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1207 SRPKTPNRASP 1217
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1147 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1206
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1207 SRPKTPNRASP 1217
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 82 PENHDEKVTLPHSVVRTRGGARGPCP-----GTEPPA*PCGRQAGDHRDHRPR---RQRT 237
P N V LP + + G GP P G P P H H P +T
Sbjct: 1147 PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQT 1206
Query: 238 GDPRNPNLGAP 270
P+ PN +P
Sbjct: 1207 SRPKTPNRASP 1217
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -2
Query: 281 SSEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAPPRVR 126
S P +P FG G+P RWR G +GG+ PG P PPR R
Sbjct: 402 SRHPLSPGFGAAGTP-RWRSGG----------LVHSGGARPGLRPSHPPRRR 442
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -2
Query: 281 SSEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAPPRVR 126
S P +P FG G+P RWR G +GG+ PG P PPR R
Sbjct: 450 SRHPLSPGFGAAGTP-RWRSGG----------LVHSGGARPGLRPSHPPRRR 490
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,059,710
Number of Sequences: 237096
Number of extensions: 1216287
Number of successful extensions: 4819
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4807
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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