Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30690
(493 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 4e-16
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 59 2e-09
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 56 1e-08
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 54 6e-08
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 49 2e-06
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 49 2e-06
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 46 2e-05
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 46 2e-05
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 45 3e-05
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 7e-05
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 43 2e-04
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 42 2e-04
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 42 4e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 41 5e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 40 8e-04
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 40 0.001
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 39 0.002
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 36 0.014
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 36 0.024
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.032
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.042
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 34 0.073
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.073
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.073
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.097
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 33 0.097
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 33 0.097
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 33 0.13
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 33 0.17
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 33 0.17
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 32 0.30
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 31 0.52
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.90
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 30 1.2
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 29 1.6
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 29 2.1
SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 2.1
SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2) 28 3.6
SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_18601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0) 28 4.8
SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30) 27 6.4
SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30) 27 6.4
SB_20878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 27 8.4
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 LCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT 188
+C++F +I V CK+I P + PY F+EF H M++R V+DK++KVNWAT
Sbjct: 385 ICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEAKFRMDQRTVMDKKLKVNWAT 444
Query: 189 SPGNQPKTDTSNHHHIFVGDL 251
+ + DT+NH HIFVGDL
Sbjct: 445 NHPGMKRGDTNNHFHIFVGDL 465
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +2
Query: 317 RIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
R+V+DP KSKG+ FVSFV++ DA AI M+ +G + ++TNW+ RK
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKG-YAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTR 463
F ++ C+++ P KG Y FV F ADA+ A M+ + + + ++ NW+T
Sbjct: 389 FNKIAKVVRCKMINSPT---DKGPYCFVEFETHADAQEAKFRMDQRTVMDKKLKVNWATN 445
Query: 464 KPPAK 478
P K
Sbjct: 446 HPGMK 450
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E+ +R AF PFG I+ + DPL +K KG+AFV + A+ A++ MNG LLG R
Sbjct: 112 ELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGR 171
Query: 437 SIRTNWSTRKPPA 475
+I+ + P A
Sbjct: 172 NIKVGRPSNVPQA 184
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
++ F FG++ +C + ++P+T K KGY F+ + + A AI +MN LG + +R
Sbjct: 215 IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGR 274
Query: 455 STRKPPAKGV 484
+ P + +
Sbjct: 275 AITPPTSSAM 284
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNC-RIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
E++ +L + F+ FG I +I+RD T SKG+AF++F ++AAI+AMNGQ L +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCN 169
Query: 434 RSIRTNWSTRKPPAKGVNEG 493
R I +++ +K +KG G
Sbjct: 170 RPITVSYAFKK-ESKGERHG 188
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ ++ E F G + N + +D +T +GY FV F+ + DA+ AI+ MN + +
Sbjct: 23 KVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGK 82
Query: 437 SIRTN 451
IR N
Sbjct: 83 PIRVN 87
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ +L AF PFG+I++ +I D T K +G+ FV F D AAI MN L R
Sbjct: 15 EVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGR 74
Query: 437 SIRTN 451
+IR N
Sbjct: 75 TIRVN 79
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 50.4 bits (115), Expect = 8e-07
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
R+AF +G I NCR++RD T KG FV + KKA+A+AAI +++G
Sbjct: 150 RKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLSG 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
R F ++NC+IVR + S G+ FV + DA+ AI +NG +G++ ++ +S
Sbjct: 64 RMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNGFTIGNKVLKVAFS 123
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
F G ++ I+ D + KG+ FV+ + +A+ AIQ +NG + ++ ++++
Sbjct: 295 FGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTLNGFMYTNKPLQSS 349
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 50.4 bits (115), Expect = 8e-07
Identities = 19/61 (31%), Positives = 41/61 (67%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+++ F G +++C+++RD T +S GYAFV++ DA A++ MNG L +++++ ++
Sbjct: 43 IKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSF 102
Query: 455 S 457
+
Sbjct: 103 A 103
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 21 LFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 191
+FG +G+V CK+IR+ YAF+ + MN + +K +KV++A
Sbjct: 46 IFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARP 105
Query: 192 PGNQPK 209
+ K
Sbjct: 106 SSTEIK 111
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
L + F+P+G I+N + D KGY FV+ +A AI +NG
Sbjct: 288 LYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHAICCLNG 329
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
E + L+E F P G IS + +D T +SKG+AF++FV + DA AI+ ++G
Sbjct: 191 ETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSG 244
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ LRE F+P+G IS+ ++++D SKG+ FV F +A A+ MNG++L S+
Sbjct: 223 IDDERLREEFSPYGTISSAKVMKDDKG-NSKGFGFVCFSSPEEATKAVTEMNGRILISKP 281
Query: 440 IRTNWSTRKPPAK 478
+ + R+ K
Sbjct: 282 LYVALAQRREERK 294
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+++ ++E A G+I + +++ DP KSKG+ FVSF +AE A+ +NG+ +G R
Sbjct: 119 DMDDEQMKEICAEAGKIVSLKVMTDPEG-KSKGFGFVSFETPEEAEEAVNVLNGKEIGGR 177
Query: 437 SI 442
+
Sbjct: 178 RL 179
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E + + + E F+ +GEI N + D T KGYA V + +A++A++A+NG + +
Sbjct: 303 EAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEALNGAEMLGQ 362
Query: 437 SIRTNWSTRKPPAK 478
+I +W+ + P+K
Sbjct: 363 NISVDWAFIRGPSK 376
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L++ F +G++ + I RD T +S+G+AFV F +K DAE A+ M+ L + W
Sbjct: 32 LKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCMDATCLMAEKFVFRW 91
Query: 455 STRKPPAKGVNEG 493
P + G
Sbjct: 92 RDMVVPRIPIGRG 104
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
++E + FGE+ +V+D T SKGYAF +V + AIQ +NG LG + +
Sbjct: 689 VKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKL 744
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 272 ILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
+++ F PFG + + +++ D T +SKGY FV F + A+ A++ MNG L R ++
Sbjct: 257 MVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLK 314
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
L E F+ G++S+ RI+ D + +SKG A++ F K+ AI +LLG+
Sbjct: 162 LEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIGLSGQKLLGA 214
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
F+ FG I +C ++RD T +S YAF+ F K D E A M+ L+ R I ++S
Sbjct: 140 FSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRRIHVDFS 196
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRT 448
LR+ F FGE+ C ++RDP+T +S+G+ F++F + + + +L G + + T
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVTT 181
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR-SIRTN 451
LR+ FA FGEI +++D +T KSKGY FV+ AE A + + G + ++
Sbjct: 26 LRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGRQANVNLA 85
Query: 452 WSTRKP-PAKGV 484
+ KP P +G+
Sbjct: 86 YLGAKPKPTRGL 97
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 296 FGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRKPPA 475
+GEI N +VRD T K KG+ F+ + + A+ NG LG R+IR + +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHCSNYRRP 61
Query: 476 KG 481
KG
Sbjct: 62 KG 63
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + F PFG + + ++ D T SK + FVS+ A+ AIQ MNG +G++ ++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLK 334
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + F PFG + + ++ D T SK + FVS+ A+ AIQ MNG +G++ ++
Sbjct: 293 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLK 349
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLG 430
+R AF +G I + +V+D T +++G +V FVK + A A + M+G+ +G
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDGRNIG 90
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAE 394
++E F FGEI C + DP T +S+G+ FV F K DA+
Sbjct: 131 MKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAK 170
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+IE LRE F G + + R++RD T KG+ +V F K A++ N + G R
Sbjct: 66 DIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKG-R 124
Query: 437 SIRTNWSTRKPPAKGVN 487
IR S KP + ++
Sbjct: 125 KIRVFPSKDKPQTEFIS 141
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + F +G++ I+RD T +S+G AF+ F+ + A+ A+ A+N + + R+I+
Sbjct: 26 LHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAVNKKQMFGRTIK 82
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 263 ETNILREAFAPFGEISNCRIV---RDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
E NIL+ FGEI + + + P + +GY FV F KK DA A++ +N +++ S
Sbjct: 400 EFNILK-ILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKALRGLNKKIVLS 458
Query: 434 RSIRTNWS 457
R++ +W+
Sbjct: 459 RALVVDWA 466
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 84 YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLYQKS 263
Y F+EF +NK++VL + + V+WA HHH D QKS
Sbjct: 433 YCFVEFKKKEDARKALRGLNKKIVLSRALVVDWA-------------HHHKSSADEPQKS 479
Query: 264 KQT 272
K T
Sbjct: 480 KHT 482
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
E+ L AFA + +IVRD + KSKGY FVSF D A++ MN
Sbjct: 227 EVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREMN 279
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
LR F FG+I +IVRD T ++KGY +V F K + A A++
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALE 112
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
L+E F+ G + + R+V D T K KGY F + + A +A++ +NG L R++R +
Sbjct: 41 LKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVD 99
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 263 ETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
+++ L AF FG +S + R+P G+AFV + DAE A++ ++G + R+I
Sbjct: 16 DSSELERAFEKFGRLSKVWVARNP-----PGFAFVEYEDYRDAEEAVRELDGANVCDRTI 70
Query: 443 RTNWSTRK 466
R +S +
Sbjct: 71 RVEFSNNR 78
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 41/73 (56%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L++ F+ + ++ + +++ D T + +G+AFV+F K + E AI ++GQ RS++ N
Sbjct: 246 LQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVN- 303
Query: 455 STRKPPAKGVNEG 493
R +G G
Sbjct: 304 QARSREQRGGGRG 316
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
N +++ F FG ++ R+ R + +SKGYAFV F A+ A M+ ++ R ++
Sbjct: 112 NEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +2
Query: 272 ILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
+++E F+ G ++ ++ +P S+G+AFV + +AE +A NG+ + +IR
Sbjct: 221 LIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVA 280
Query: 452 WST 460
+ +
Sbjct: 281 YGS 283
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 281 EAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADA-EAAIQAMN--GQLLGSRSIR 445
+ +P+G I +VR +T SKGY FV + + +A +A Q +N + +G R +R
Sbjct: 131 DLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILR 188
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEA 397
L+E F+ +GE+ I D LT + +G+AFV F +++A+A
Sbjct: 45 LKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADA 85
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 35.5 bits (78), Expect = 0.024
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ N+L E F FG + + I+RD + KS+ FV F AEAA MNG + +
Sbjct: 534 DVTENVLLELFNKFGPVKDVVILRDE-SGKSRQSGFVHFWSSDVAEAANVGMNGCDILGK 592
Query: 437 SIRTNWS 457
+ T ++
Sbjct: 593 IVETKYA 599
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 35.1 bits (77), Expect = 0.032
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQL 424
+ +L +AF+ FG++ +V D + +SKG+ V F +K +A A+Q ++ L
Sbjct: 137 VTNELLEQAFSQFGDVERAVVVCD-VRGRSKGHGIVEFSRKNNAHNAMQKISESL 190
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 34.7 bits (76), Expect = 0.042
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSF 373
E LRE F +GE+++ ++ D T KS+G+ +V+F
Sbjct: 24 ETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 34.7 bits (76), Expect = 0.042
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 299 GEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
GEI R+ DP T +KG+AF +F ++ A AI +N
Sbjct: 177 GEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTLN 215
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSF 373
F FG+I+ C++V D LT SKG AFV +
Sbjct: 436 FKQFGDIAYCKVVVDHLTQHSKGSAFVKY 464
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.9 bits (74), Expect = 0.073
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 296 FGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
+GEI N +VRD T K KG+ F+ + + A+ NG
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 33.9 bits (74), Expect = 0.073
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+ +AF FG + I+RD + +S+G+ FV AI+ MN +G R+I
Sbjct: 25 IEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVAL 83
Query: 455 STRKPPAKG 481
+ K +G
Sbjct: 84 ALDKTENRG 92
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 33.9 bits (74), Expect = 0.073
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +2
Query: 344 KSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
+S+G+ FV+F DA+ A++++NG+ + R+++
Sbjct: 97 RSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLK 130
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 33.5 bits (73), Expect = 0.097
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQ 421
F G I + R++ DP++ +KG+AF +F K +A+ A++ ++ +
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKLDNK 216
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 33.5 bits (73), Expect = 0.097
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 329 DPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
+PL L+ +G+ FV+F A+A A + +NG ++ R + +
Sbjct: 117 NPLNLRIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVS 157
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 33.5 bits (73), Expect = 0.097
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
+I + L F P+G I + I+R T KSKG+ +V++ A+ A+
Sbjct: 73 DIRKSSLESVFGPYGAIEDLSIIRTQ-TGKSKGFGYVTYENAESAQRAL 120
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
++E F+ +G + + D S+G+A+V +V + E A++ M+G + + I
Sbjct: 1173 VQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEI 1228
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+EAF +GE+ + I + P + YAFV F + + A A + M+ + +G ++ +
Sbjct: 265 LKEAFERYGEVIDVDIKKQP---GNNPYAFVQFAELSSAIQARRKMDREYVGRNRVKVGF 321
Query: 455 STRKP 469
P
Sbjct: 322 GKVNP 326
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 24 FGQIGDVKGCKIIREPGNDPYAFLEF 101
F + G+V I ++PGN+PYAF++F
Sbjct: 269 FERYGEVIDVDIKKQPGNNPYAFVQF 294
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
L++ F+ FG++ + R + KG+AF+ F K AE +Q N
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFN 150
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.9 bits (69), Expect = 0.30
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 323 VRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQ-LLGSRSI 442
+RD ++LK +GY FV F DAE A+ +NG+ L+G R +
Sbjct: 715 IRD-ISLK-RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVV 753
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+ F +G + + + R+P G+AF F + DAE A++ ++G+ + + +R
Sbjct: 48 IENEFGYYGPLKDVWVARNP-----PGFAFCIFDDRRDAEDAVRELDGRYICGQRVRVEL 102
Query: 455 S---TRKPPAKGVNE 490
+ +R P G NE
Sbjct: 103 AKGPSRGRPRMGSNE 117
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+ F FG + + + R+P G+AF F + DAE A++ ++G+ + + R
Sbjct: 18 IEREFETFGPLRDVWVARNP-----PGFAFCVFEDRRDAEDAVRELDGRYICGQRARVEL 72
Query: 455 STRKPPAKG 481
+ K P++G
Sbjct: 73 A--KGPSRG 79
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 31.1 bits (67), Expect = 0.52
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAE 394
LR F +G + +IVRD + SKGYAF++F + A+
Sbjct: 24 LRAFFEEYGVVKESKIVRDKHGV-SKGYAFITFESQEVAD 62
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.1 bits (67), Expect = 0.52
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI-QAMNGQLLGSRSIRTN 451
LR+ F FGE+ + +V + AFV F +A AEAA ++ N +L R ++
Sbjct: 320 LRDHFYQFGELRSISMV------PRQNCAFVCFTSRAAAEAAADRSFNKLILKGRRLKIM 373
Query: 452 W--STRKPPAKGVNEG 493
W S + PA G G
Sbjct: 374 WGKSQGQQPAPGRQGG 389
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 30.3 bits (65), Expect = 0.90
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 281 EAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
E F+ FG++ + D + +S G A V FV++ DA+ A++ NG
Sbjct: 1 ELFSEFGQVKRSCVHYDA-SGRSHGTAEVVFVRREDAQQALKQYNG 45
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
L+ F +G+I R +RD Y FV F K+ A AI +NG
Sbjct: 18 LKAVFTKYGQIEKVRKIRD--------YGFVYFAKRESAVQAIDGING 57
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
F+ FG I + ++ TLK +G AFV F A A+++M G + +R ++ K
Sbjct: 31 FSQFGPILDIVALK---TLKMRGQAFVVFKDIGSATNALRSMQGFPFYDKPMRIQYAKGK 87
Query: 467 PPAKGVNEG 493
A EG
Sbjct: 88 SDAVAKAEG 96
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
F G I R++ D +++GYAFV + K DA+ ++ +N
Sbjct: 94 FETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKTLN 135
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 263 ETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
E+ IL E F+ GEI++ I + T + KG+ V+F +A ++ + G I
Sbjct: 134 ESQIL-EHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHGYDII 192
Query: 443 RTNWSTRKPPAK 478
+ K P K
Sbjct: 193 TEYYMNLKQPKK 204
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 IETNILREAFAPFGE-ISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
+E+ I E F+ GE + + + +R L+ KSKG+AFV KK E+ +
Sbjct: 54 VESTIF-EYFSTLGEQVEHVKCIRT-LSGKSKGFAFVRLRKKEAVESVL 100
>SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 365
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 164 LVEDHSLVHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYL 30
LV D+S C RRRV R + K I+ + + TF+ ++
Sbjct: 224 LVSDNSFSDSSDECERRRVQRCIRKRIKTTKNILLVVCTFFFCWM 268
>SB_38236| Best HMM Match : YiaAB (HMM E-Value=3.2)
Length = 177
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 335 LTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWST 460
LTLK K + ++++ KA +AAI +M+ + R N +T
Sbjct: 114 LTLKEKVFVAIAWLPKATVQAAIGSMSLDIARERGYTANENT 155
>SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 253 IRNRNKHTPRGLRSIW*DIELSHSTRSINAQ 345
IR N HTP R++ + +H TR++N Q
Sbjct: 70 IRTLNTHTPHSTRTLNTHTQHAHLTRTLNTQ 100
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 353 GYAFVSFVKKADAEAAIQAMNGQ-LLGSRSI 442
GY FV F DA+ + +NG+ LLG R I
Sbjct: 39 GYGFVEFDDYRDADDCVYDLNGRNLLGEREI 69
>SB_18601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKAD 388
+AP ++ + + +DP+T KS+GY FV KK +
Sbjct: 206 WAPVRKLFDAMLAKDPVTNKSRGY-FVLKAKKEE 238
>SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0)
Length = 413
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKK 382
+ P + N + +DP+T+KS+GY FV KK
Sbjct: 368 WTPVRMLFNAMLPKDPVTMKSRGY-FVLKAKK 398
>SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30)
Length = 343
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 77 ISWLPYNLATFYIAYLTKQR 18
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
>SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30)
Length = 343
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 77 ISWLPYNLATFYIAYLTKQR 18
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
>SB_20878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.5 bits (58), Expect = 6.4
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -2
Query: 348 DLSVNGSRTMRQFDISPNGAKASRSMFVSISDTDRPRICDDDY*CPSSAGYQDSSPN*PS 169
D+S S+ + DIS +KA +S + P CD + PS A Y+ + PS
Sbjct: 6 DISHGPSKASYKCDISHGPSKAPYKCDISHGPSKAPYKCDISH-GPSKAPYKCDISHGPS 64
Query: 168 FPCRGPLAC--SWRPALWPPPCD 106
+ P C S P+ P CD
Sbjct: 65 ---KAPYKCDISHGPSKAPYKCD 84
Score = 27.5 bits (58), Expect = 6.4
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -2
Query: 348 DLSVNGSRTMRQFDISPNGAKASRSMFVSISDTDRPRICDDDY*CPSSAGYQDSSPN*PS 169
D+S S+ + DIS +K S +S + P CD + PS A Y+ + PS
Sbjct: 84 DISHGPSKAPYKCDISHGPSKVSYKCDISHGPSKAPYKCDISH-GPSKAPYKCDISHGPS 142
Query: 168 FPCRGPLAC--SWRPALWPPPCD 106
+ P C S P+ P CD
Sbjct: 143 ---KAPYKCDISHGPSKAPYKCD 162
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 344 KSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
K +GYAF+ + + D AA + +G+ + R I
Sbjct: 45 KPRGYAFIEYEHERDMHAAYKHADGKKIDGRRI 77
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 263 ETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFV 367
E ++LR F P+G+++ I+ D T KSKG V
Sbjct: 332 ELDVLRY-FRPYGQVAKVHILTDRETGKSKGCGVV 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,825,485
Number of Sequences: 59808
Number of extensions: 349329
Number of successful extensions: 954
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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