Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30690
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 98 3e-21
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 98 3e-21
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 98 3e-21
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 94 6e-20
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 58 3e-09
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 58 3e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 58 3e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 54 4e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 4e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 4e-08
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 52 2e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 51 4e-07
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 51 4e-07
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 51 4e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 48 5e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 48 5e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 48 5e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 47 6e-06
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 47 6e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 46 1e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 46 1e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 45 3e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 3e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 3e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 3e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 3e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 3e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 45 3e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 5e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 43 1e-04
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 43 1e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 42 2e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 3e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 3e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.004
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.004
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 36 0.021
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 35 0.028
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.037
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.037
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.037
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 35 0.037
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 33 0.085
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 33 0.085
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.11
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.11
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.15
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.15
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.15
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 33 0.15
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 33 0.15
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.45
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.45
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 0.60
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 0.60
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 30 1.0
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 30 1.0
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.0
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 30 1.0
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 30 1.0
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 30 1.0
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 30 1.0
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 1.8
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 2.4
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 3.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 3.2
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 3.2
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 28 3.2
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 28 3.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 3.2
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 3.2
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81473-1|CAB03897.1| 302|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 27 7.4
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 27 7.4
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 27 7.4
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 27 7.4
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 27 7.4
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 27 7.4
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 27 7.4
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 27 9.8
AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical ... 27 9.8
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 27 9.8
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 EVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNW 182
E F+ TLF QIG V K+I + NDPYAF+EF+ H MNKR++LD+EMKVNW
Sbjct: 59 EDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNW 118
Query: 183 ATSPG-NQPKTDTSNHHHIFVGDL 251
A PG Q K DT+ H H+FVGDL
Sbjct: 119 AVEPGQQQSKIDTTRHFHVFVGDL 142
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ LREAF PFG++S+ +++RD T KSKGY FVS+ K+ +AE AI+ MNGQ LG R
Sbjct: 145 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 204
Query: 437 SIRTNWSTRKP 469
+IRTNW+TRKP
Sbjct: 205 TIRTNWATRKP 215
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 309
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
+ + + F G ++ +++ D + YAFV F A A+Q MN +LL R
Sbjct: 57 VTEDFIATLFNQIGSVTKTKVIFDG---SNDPYAFVEFSDHGQASQALQTMNKRLLLDRE 113
Query: 440 IRTNWS 457
++ NW+
Sbjct: 114 MKVNWA 119
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 FGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT-SPGN 200
FG + D K + + Y F+ + MN + + + ++ NWAT PG+
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 217
Query: 201 QPKTDTSN 224
Q K N
Sbjct: 218 QEKPSHYN 225
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ LREAF PFG++S+ +++RD T KSKGY FVS+ K+ +AE AI+ MNGQ LG R
Sbjct: 32 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 91
Query: 437 SIRTNWSTRKP 469
+IRTNW+TRKP
Sbjct: 92 TIRTNWATRKP 102
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 196
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 168 MKVNWATSPGNQP-KTDTSNHHHIFVGDL 251
MKVNWA PG Q K DT+ H H+FVGDL
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDL 29
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 FGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT-SPGN 200
FG + D K + + Y F+ + MN + + + ++ NWAT PG+
Sbjct: 45 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 104
Query: 201 QPKTDTSN 224
Q K N
Sbjct: 105 QEKPSHYN 112
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ LREAF PFG++S+ +++RD T KSKGY FVS+ K+ +AE AI+ MNGQ LG R
Sbjct: 42 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 101
Query: 437 SIRTNWSTRKP 469
+IRTNW+TRKP
Sbjct: 102 TIRTNWATRKP 112
Score = 60.9 bits (141), Expect = 5e-10
Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +3
Query: 138 MNKRVVLDKEMKVNWATSPG-NQPKTDTSNHHHIFVGDL 251
MNKR++LD+EMKVNWA PG Q K DT+ H H+FVGDL
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDL 39
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 206
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 FGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT-SPGN 200
FG + D K + + Y F+ + MN + + + ++ NWAT PG+
Sbjct: 55 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 114
Query: 201 QPKTDTSN 224
Q K N
Sbjct: 115 QEKPSHYN 122
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ LREAF PFG++S+ +++RD T KSKGY FVS+ K+ +AE AI+ MNGQ LG R
Sbjct: 113 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 172
Query: 437 SIRTNWSTRKP 469
+IRTNW+TRKP
Sbjct: 173 TIRTNWATRKP 183
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 138 MNKRVVLDKEMKVNWATSPG-NQPKTDTSNHHHIFVGDL 251
+ K V+ EMKVNWA PG Q K DT+ H H+FVGDL
Sbjct: 72 VTKTKVIFDEMKVNWAVEPGQQQSKIDTTRHFHVFVGDL 110
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 277
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 FGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT-SPGN 200
FG + D K + + Y F+ + MN + + + ++ NWAT PG+
Sbjct: 126 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 185
Query: 201 QPKTDTSN 224
Q K N
Sbjct: 186 QEKPSHYN 193
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 93.9 bits (223), Expect = 6e-20
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
EI++ LREAF FGE+S +I+RD T K KGY FVS+ ++ DAE AI MNG LG R
Sbjct: 142 EIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRR 201
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+IRTNW+TRKP G G
Sbjct: 202 TIRTNWATRKPDEDGERGG 220
Score = 80.6 bits (190), Expect = 6e-16
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 9 FLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT 188
FL TLF QIG V KII E NDPYAF+EF+ H N R +L+KEM V WA
Sbjct: 55 FLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAF 114
Query: 189 SP----GNQPKTDTSNHHHIFVGDLYQKSKQT 272
P N+ K +TS H H+FVGDL + T
Sbjct: 115 EPREPGENRSKPETSRHFHVFVGDLCSEIDST 146
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R AF FG I+ R T K +GYAFV F K A AI MN +G + +R +W
Sbjct: 271 IRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSW 324
Query: 455 ----STRKPPAKGVNEG 493
+ KP +G G
Sbjct: 325 GKSGDSGKPSERGSGGG 341
Score = 30.3 bits (65), Expect = 0.79
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I L F G + +I+ + L + YAFV F A A+Q+ NG+ L +
Sbjct: 51 ITDEFLATLFNQIGAVMKAKIIFEGL---NDPYAFVEFSDHNQATLALQSHNGRELLEKE 107
Query: 440 IRTNWSTRKPPAKGVN 487
+ W+ +P G N
Sbjct: 108 MHVTWAF-EPREPGEN 122
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +L+ F FGE+S +++RD T KSKGY FVSF K +AE AI MNG+ +G R
Sbjct: 145 DVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKR 204
Query: 437 SIRTNWSTRK 466
++RTNW+ RK
Sbjct: 205 AVRTNWAARK 214
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
LR+ F+ +G+I+ RI K++ YAFV + KK A AI MNG+ + +R +W
Sbjct: 253 LRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSW 306
Query: 455 S-TRKPPAKGVN 487
T+ P + +N
Sbjct: 307 GRTQAVPNQALN 318
Score = 34.7 bits (76), Expect = 0.037
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 150 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDL 251
+VL + ++ A+ P + + DTS H H+FVGDL
Sbjct: 109 IVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDL 142
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/74 (18%), Positives = 30/74 (40%)
Frame = +3
Query: 18 TLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPG 197
T FG++ + K + ++ + Y F+ F MN + + + ++ NWA
Sbjct: 156 TKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKN 215
Query: 198 NQPKTDTSNHHHIF 239
++ D +F
Sbjct: 216 SEENRDKLTFEQVF 229
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +L E F+ G + + R+ RD + S GYA+V+F + ADAE A+ MN +++ R
Sbjct: 67 DVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGR 126
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+R WS R P A+ G
Sbjct: 127 PMRIMWSQRDPAARRAGNG 145
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ + + F+ FG I +C++ D SKGY FV F + A+ AI+ +NG LL +
Sbjct: 156 IDNKSVYDTFSLFGNILSCKVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKK 214
Query: 440 I 442
+
Sbjct: 215 V 215
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +L E F+ G + + R+ RD + S GYA+V+F + ADAE A+ MN +++ R
Sbjct: 67 DVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGR 126
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+R WS R P A+ G
Sbjct: 127 PMRIMWSQRDPAARRAGNG 145
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ + + F+ FG I +C++ D SKGY FV F + A+ AI+ +NG LL +
Sbjct: 156 IDNKSVYDTFSLFGNILSCKVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKK 214
Query: 440 I 442
+
Sbjct: 215 V 215
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +IL E F+ G + + R+ RD T S GYA+V+F + ADAE A+ MN + L +
Sbjct: 42 DVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGK 101
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+R WS R P + G
Sbjct: 102 PMRIMWSQRDPAMRRSGAG 120
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ + + F+ FG I +C++ D SKGY FV F + A+ AIQ +NG LL +
Sbjct: 131 IDNKSIYDTFSLFGNILSCKVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 189
Query: 440 I 442
+
Sbjct: 190 V 190
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FA FG I++C ++ + KSKG+ FV+F +AE A+QA++ + ++
Sbjct: 229 LEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 283
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +IL E F+ G + + R+ RD T S GYA+V+F + ADAE A+ MN + L +
Sbjct: 42 DVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGK 101
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+R WS R P + G
Sbjct: 102 PMRIMWSQRDPAMRRSGAG 120
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FA FG I++C ++ + KSKG+ FV+F +AE A+QA++ + ++
Sbjct: 169 LEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 223
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +IL E F+ G + + R+ RD T S GYA+V+F + ADAE A+ MN + L +
Sbjct: 42 DVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGK 101
Query: 437 SIRTNWSTRKPPAKGVNEG 493
+R WS R P + G
Sbjct: 102 PMRIMWSQRDPAMRRSGAG 120
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ + + F+ FG I +C++ D SKGY FV F + A+ AIQ +NG LL +
Sbjct: 131 IDNKSIYDTFSLFGNILSCKVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 189
Query: 440 I 442
+
Sbjct: 190 V 190
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FA FG I++C ++ + KSKG+ FV+F +AE A+QA++ + ++
Sbjct: 229 LEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 283
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+R F GEI +C++VRD +T +S GY FV++V++ DA A+ + NG L +++I+ ++
Sbjct: 58 VRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSY 117
Query: 455 S 457
+
Sbjct: 118 A 118
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQL 424
L F PFG+I RI+ D +T SKG FV F KK +A+ AI+ +NG +
Sbjct: 144 LESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSI 193
Score = 46.8 bits (106), Expect = 9e-06
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+ + +L + F+ FG I N +I+RD LT + KGYAFVS +A A+ ++NG L +
Sbjct: 384 DTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGK 442
Query: 437 SIRTNWSTRKP 469
+++ + + P
Sbjct: 443 TLQVVFKSSTP 453
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 18 TLFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWAT 188
+LF IG+++ CK++R+ G Y F+ + N + +K +KV++A
Sbjct: 60 SLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYAR 119
Query: 189 SPGNQPK 209
+Q K
Sbjct: 120 PSNDQIK 126
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
EI ++LR AF PFG I + + DP T K +AFV + A A ++MNGQ+LG R
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 437 SIRTN 451
+++ N
Sbjct: 172 NLKVN 176
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F FGEI C++ R P +G+ ++ F AI MN LG + +R N+
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLR-NF 281
Query: 455 ST 460
+T
Sbjct: 282 TT 283
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
EI ++LR AF PFG I + + DP T K +AFV + A A ++MNGQ+LG R
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 437 SIRTN 451
+++ N
Sbjct: 172 NLKVN 176
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F FGEI C++ R P +G+ ++ F AI MN LG + +R
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 455 STRKPPA 475
P A
Sbjct: 283 CVTPPDA 289
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
EI ++LR AF PFG I + + DP T K +AFV + A A ++MNGQ+LG R
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 437 SIRTN 451
+++ N
Sbjct: 172 NLKVN 176
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F FGEI C++ R P +G+ ++ F AI MN LG + +R
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 455 STRKPPA 475
P A
Sbjct: 283 CVTPPDA 289
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTR 463
FA G ++N RIV D T + +G+AFV F ++A A+ A++ +NG R++R N++ +
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYANK 84
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNC-RIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
E++ +L + F+ FG I +I+RD + SKG+AF++F ++ A++AMNGQ L +
Sbjct: 110 EVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCN 169
Query: 434 RSIRTNWSTRKPPAKGVNEG 493
R+I +++ ++ +KG G
Sbjct: 170 RAITVSYAFKR-DSKGERHG 188
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNC-RIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
E++ +L + F+ FG I +I+RD + SKG+AF++F ++ A++AMNGQ L +
Sbjct: 120 EVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCN 179
Query: 434 RSIRTNWSTRKPPAKGVNEG 493
R+I +++ ++ +KG G
Sbjct: 180 RAITVSYAFKR-DSKGERHG 198
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRT 448
N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G+L+ R +R
Sbjct: 33 NDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
Query: 449 NWSTRKPPA 475
+ P+
Sbjct: 93 TLAKYDRPS 101
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRT 448
N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G+L+ R +R
Sbjct: 33 NDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
Query: 449 NWSTRKPPA 475
+ P+
Sbjct: 93 TLAKYDRPS 101
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E+ +L +AF + ++VR+ T KSKGY FVSF D A++ M+G+ +G+R
Sbjct: 213 EVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNR 272
Query: 437 SIRTNWSTRK 466
I+ S K
Sbjct: 273 PIKLRKSAWK 282
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTR 463
F+ G+I+N RIV D T + +G+AF+ F ++ A+ A++ MNG R +R N + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVNLANK 83
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 47.6 bits (108), Expect = 5e-06
Identities = 18/46 (39%), Positives = 35/46 (76%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
+++RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 37 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 47.6 bits (108), Expect = 5e-06
Identities = 18/46 (39%), Positives = 35/46 (76%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
+++RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 37 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 47.6 bits (108), Expect = 5e-06
Identities = 18/46 (39%), Positives = 35/46 (76%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
+++RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 37 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 47.2 bits (107), Expect = 6e-06
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
LR+ F FGE++ C ++RDP T +++G+ F++FV + + + +L G +
Sbjct: 61 LRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 47.2 bits (107), Expect = 6e-06
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
LR+ F FGE++ C ++RDP T +++G+ F++FV + + + +L G +
Sbjct: 61 LRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 46.8 bits (106), Expect = 9e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
F+ G +SN RIV D T + +G+AFV F ++A A+ A+ NG R++R N
Sbjct: 24 FSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVN 78
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQ 406
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L FAPFG I + ++ D +T SK + FVS+ A AI AMNG +GS+ ++
Sbjct: 351 LINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 407
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L FAPFG I + ++ D +T SK + FVS+ A AI AMNG +GS+ ++
Sbjct: 515 LINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L FAPFG I + ++ D +T SK + FVS+ A AI AMNG +GS+ ++
Sbjct: 515 LINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L FAPFG I + ++ D +T SK + FVS+ A AI AMNG +GS+ ++
Sbjct: 444 LINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 500
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L FAPFG I + ++ D +T SK + FVS+ A AI AMNG +GS+ ++
Sbjct: 515 LINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ +L AF PFG++ I D + K +G+ FV F DA AI MN L +
Sbjct: 21 DVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGK 80
Query: 437 SIRTNWSTRKPP 472
+IR N++ +PP
Sbjct: 81 TIRVNFA--RPP 90
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FAPFG I + ++ D T +SK + FVS+ ++AAI AMNG +G + ++
Sbjct: 445 LIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
+R FA FGE+ ++R SKG AFV + DA AI A++G
Sbjct: 140 VRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHGLDAHMAISALHG 186
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FAPFG I + ++ D T +SK + FVS+ ++AAI AMNG +G + ++
Sbjct: 445 LIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
+R FA FGE+ ++R SKG AFV + DA AI A++G
Sbjct: 140 VRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHGLDAHMAISALHG 186
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
++ + +R F+ G + + ++V D T K KGY F+ F AE AI+ +NG L R
Sbjct: 28 DVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGR 87
Query: 437 SIRTN 451
+R +
Sbjct: 88 ILRVD 92
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 260 IETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
I+ + + F+ FG I +C++ D SKGY FV F + A+ AIQ +NG LL +
Sbjct: 68 IDNKSIYDTFSLFGNILSCKVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 126
Query: 440 I 442
+
Sbjct: 127 V 127
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
L + FA FG I++C ++ + KSKG+ FV+F +AE A+QA++ + ++
Sbjct: 166 LEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 220
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 383 ADAEAAIQAMNGQLLGSRSIRTNWSTRKPPAKGVNEG 493
ADAE A+ MN + L + +R WS R P + G
Sbjct: 21 ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG 57
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
F+ FG+I+NC IVRD + S YAF+ F E A M+ L+ R I ++S
Sbjct: 261 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 21 LFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 191
+F + G + C+I+R+ G+ YAF+EF M+ ++ D+ + V+++ S
Sbjct: 260 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
F+ FG+I+NC IVRD + S YAF+ F E A M+ L+ R I ++S
Sbjct: 261 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 21 LFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 191
+F + G + C+I+R+ G+ YAF+EF M+ ++ D+ + V+++ S
Sbjct: 260 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
F+ FG+I+NC IVRD + S YAF+ F E A M+ L+ R I ++S
Sbjct: 192 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 248
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 21 LFGQIGDVKGCKIIRE--PGND-PYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATS 191
+F + G + C+I+R+ G+ YAF+EF M+ ++ D+ + V+++ S
Sbjct: 191 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 250
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ L+E F+P G+I+ C L KG+AF+ +A AE+A +A++G+++ R
Sbjct: 126 EVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGR 178
Query: 437 SIRTNWS 457
+R ++
Sbjct: 179 QVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E++ L+E F+P G+I+ C L KG+AF+ +A AE+A +A++G+++ R
Sbjct: 126 EVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGR 178
Query: 437 SIRTNWS 457
+R ++
Sbjct: 179 QVRVRFA 185
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
F+ +GE+ N ++RD T KSKG+AF+ + + A+ NG L R IR +
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVD 112
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLL 427
F FG + R+ R+ T KG+A+V F KA AE A ++MNG L+
Sbjct: 52 FRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGYLM 98
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
LR+ F FGEI+ C +V D + S+G+ F+ F DA AA + L IR ++
Sbjct: 92 LRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDF 151
Query: 455 STRK 466
S K
Sbjct: 152 SLTK 155
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
E+ + LR+ F G + I RD +T KG+AFV+F + DA AI +N +
Sbjct: 186 EMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHM 245
Query: 437 SIRTNWS 457
++ W+
Sbjct: 246 VLKVEWT 252
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Frame = +2
Query: 260 IETNILREAFAPF----GEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG-QL 424
I T++ + P G+I + R++ DP++ S+GYAFV++ K DA AA + +G ++
Sbjct: 207 IPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEI 266
Query: 425 LGSRSIRTNWS 457
+ ++ N S
Sbjct: 267 STGKPLKVNVS 277
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 344 KSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRKPP 472
K K YAF+ F ++ D A++ NG+ L + S KPP
Sbjct: 408 KVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEA--SLAKPP 448
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F FG +S+ I+ + SKG+ FV+ + DAE A Q ++G ++ R I N
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 455 STRKPPAKGV 484
+T + +K V
Sbjct: 227 ATARVHSKKV 236
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F FG +S+ I+ + SKG+ FV+ + DAE A Q ++G ++ R I N
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 455 STRKPPAKGV 484
+T + +K V
Sbjct: 227 ATARVHSKKV 236
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
LRE FA FG I +C ++RD KS+G AFV+F ++ A A + M+
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRS 439
L E F FG+I ++ D T KS+GY FV+ +A AE A + N + G ++
Sbjct: 51 LHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKA 105
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
++LRE + +G I++ + + D T KGY FV F A AA+ +N
Sbjct: 121 DLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLN 169
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 296 FGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
FG + + RI+R P +S+G F K E I A+NG
Sbjct: 211 FGMVISTRILRTPDN-QSRGVGFARMDSKEKCEVIISALNG 250
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 269 NILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
++LRE + +G I++ + + D T KGY FV F A AA+ +N
Sbjct: 95 DLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLN 143
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 296 FGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
FG + + RI+R P +S+G F K E I A+NG
Sbjct: 185 FGMVISTRILRTPDN-QSRGVGFARMDSKEKCEVIISALNG 224
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L+ F +GE+S ++V D T KG+A V FV A AA A++G + R +
Sbjct: 295 LQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHILP 354
Query: 455 STRKPPAKGVNE 490
K +G E
Sbjct: 355 GDEKRTKEGEEE 366
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 278 REAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN 415
R F +G + +C I+RD T SKG FV+F + DA A A++
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRD 331
LRE FA FG I +C ++RD
Sbjct: 158 LREIFAKFGHIEDCSVLRD 176
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 323 VRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRKPPAKGVNEG 493
+RD L LK+ G+ FV F K DAE A+ +NG+ LG + ++S KP G + G
Sbjct: 29 IRDVL-LKN-GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 323 VRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRKPPAKGVNEG 493
+RD L LK+ G+ FV F K DAE A+ +NG+ LG + ++S KP G + G
Sbjct: 29 IRDVL-LKN-GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 323 VRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRKPPAKGVNEG 493
+RD L LK+ G+ FV F K DAE A+ +NG+ LG + ++S KP G + G
Sbjct: 29 IRDVL-LKN-GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS--KPRGGGGDRG 81
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+ + F+ +G+I N + D T KGYA V + + +A AI N L ++++ +W
Sbjct: 71 VHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDW 130
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.028
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 326 RDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
+DP T G+ F+ FV+KADAE + N + RS+ +W+ K
Sbjct: 131 KDPKTCA--GFGFIQFVEKADAEKGREFFNTNKVLGRSVAADWALDK 175
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAM-NGQLLGS 433
+ + +++E + FG+I I + + SKG AFV F +A I+ + +G ++ +
Sbjct: 273 DTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDN 332
Query: 434 RSIRTN 451
R ++ N
Sbjct: 333 RLVKAN 338
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 34.7 bits (76), Expect = 0.037
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 69 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.037
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 89 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.037
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 90 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
+ E FA G+++ I +D T K +AFV F K + A+ ++G + +R I
Sbjct: 62 IEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VLSGTMFRNRKIMVTL 120
Query: 455 STRKPPAKG 481
P G
Sbjct: 121 KRTNKPGMG 129
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.085
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLL 427
L E F+ G + + RI+ D T +SKG +V F + + A+NGQ L
Sbjct: 41 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRL 90
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+I+ ++R+ F FG I + D +++G+A ++F DA+ + + +N L R
Sbjct: 137 KIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNNFELAGR 195
Query: 437 SIR 445
IR
Sbjct: 196 CIR 198
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.5 bits (73), Expect = 0.085
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLL 427
L E F+ G + + RI+ D T +SKG +V F + + A+NGQ L
Sbjct: 186 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRL 235
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+I+ ++R+ F FG I + D +++G+A ++F DA+ + + +N L R
Sbjct: 282 KIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNNFELAGR 340
Query: 437 SIR 445
IR
Sbjct: 341 CIR 343
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 281 EAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
E F G++ + D G+ FV + + DAE A+Q ++ + R IR +W
Sbjct: 55 ELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADW 112
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 290 APFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAI 403
A G + RIVRD T K KG+AFV+F + + A+
Sbjct: 268 AQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.11
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
E + LR F +G+I +V D K +GYAF+ + KA+ A + +G
Sbjct: 114 ETSESKLRREFEAYGKIKKLTMVHDEAG-KPRGYAFIEYSDKAEMHTAYKKADG 166
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L E F FG I + R P G+AFV + DAE A++A++G + R
Sbjct: 19 LEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRALDGSRICGVRARVEL 73
Query: 455 ST 460
ST
Sbjct: 74 ST 75
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L E F FG I + R P G+AFV + DAE A++A++G + R
Sbjct: 19 LEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRALDGSRICGVRARVEL 73
Query: 455 ST 460
ST
Sbjct: 74 ST 75
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNW 454
L E F FG I + R P G+AFV + DAE A++A++G + R
Sbjct: 19 LEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRALDGSRICGVRARVEL 73
Query: 455 ST 460
ST
Sbjct: 74 ST 75
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLG 430
E+ L F +GE++ ++ D +S+G+AFV F + A+ A + G
Sbjct: 39 EVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKG 96
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
LR F FG++ + D T + +AF+ F ++ A+ A + Q G+R
Sbjct: 126 LRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA-SSQTKQTFGTR 178
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLG 430
E+ L F +GE++ ++ D +S+G+AFV F + A+ A + G
Sbjct: 39 EVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKG 96
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 101 YVSHGGGHSAGRHEQASGPRQGNEG 175
Y S G +S ++QA G RQGN G
Sbjct: 266 YQSFAGNNSGFDYQQAQGARQGNNG 290
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
LR F FG++ + D T + +AF+ F ++ A+ A + Q G+R
Sbjct: 126 LRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA-SSQTKQTFGTR 178
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 31.9 bits (69), Expect = 0.26
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN- 451
+ + F G +S I D + KG+A+V F +K + A+ AM LL R I+ +
Sbjct: 94 IEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-AMTDSLLRGRQIKVDP 152
Query: 452 WSTRKPPAKGVN 487
T KP N
Sbjct: 153 KRTNKPGMSTTN 164
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 320 IVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
+V D + KG+A+V+F + AI +NG G+R ++ N
Sbjct: 43 LVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVN 86
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 353 GYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
GY FV F +A+A+ I M+G+ L + I +W+
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWA 165
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 30.7 bits (66), Expect = 0.60
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
LRE F F + + ++V+ L +SKGY F++F + AE I+ + + L RS + N
Sbjct: 82 LREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAE-EIRKLTPKQLEFRSRKLN 138
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 30.7 bits (66), Expect = 0.60
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTN 451
LRE F F + + ++V+ L +SKGY F++F + AE I+ + + L RS + N
Sbjct: 83 LREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAE-EIRKLTPKQLEFRSRKLN 139
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
SKG+ FV+ DA+ A NG + R + N +T++
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
SKG+ FV+ DA+ A NG + R + N +T++
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
SKGYAF ++ + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 287 FAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNG 418
F FGEI + R TLK +G A V F + A AA +A+NG
Sbjct: 32 FKQFGEIVSVMCFR---TLKMRGQAHVIFKELPAASAAREALNG 72
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWSTRK 466
SKG+ FV+ DA+ A NG + R + N +T++
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
SKGYAF ++ + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
SKGYAF ++ + AI +NG LG + +
Sbjct: 305 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 336
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 347 SKGYAFVSFVKKADAEAAIQAMNGQLLGSRSI 442
SKGYAF ++ + AI +NG LG + +
Sbjct: 308 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 339
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGSR 436
+I T + E F FG + R+ T +++G AFV + DA+ A + ++G + +R
Sbjct: 29 KITTEEMYEIFGKFGAVRQIRVGN---TAETRGTAFVVYEDIFDAKTACEHLSGYNVSNR 85
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPL-TLKSKGYAFVSFVKKADAEAAIQAMNG 418
L E F+ +G I N + D +GY +V + DAE +I+ M+G
Sbjct: 149 LEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMDG 197
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 IETNILREAFAPFGEIS--NCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMNGQLLGS 433
+ T+ L E F G+I+ + RI ++ KSKG + + +A A+ +NGQ L
Sbjct: 199 VGTDKLYEVFGMAGKITWMDFRIDKEG---KSKGVCVIQYTHPIEAVQAVSMLNGQRLFD 255
Query: 434 RSI 442
R++
Sbjct: 256 RNL 258
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 237 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 109
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 1446 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 1488
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 264 SISDTDRPRICDD---DY*CPSSAGYQDSSPN*PSFPCR 157
S++D + C+D Y C GY D+SPN P R
Sbjct: 387 SLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGR 425
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 258 SDTDRPRIC----DDDY*CPSSAGYQDSSPN 178
+D DR C DDDY C G++D SP+
Sbjct: 1184 NDCDRNARCIQIGDDDYSCACPPGFKDKSPS 1214
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 237 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 109
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 264 SISDTDRPRICDD---DY*CPSSAGYQDSSPN*PSFPCR 157
S++D + C+D Y C GY D+SPN P R
Sbjct: 971 SLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGR 1009
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 258 SDTDRPRIC----DDDY*CPSSAGYQDSSPN 178
+D DR C DDDY C G++D SP+
Sbjct: 1768 NDCDRNARCIQIGDDDYSCACPPGFKDKSPS 1798
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 237 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 109
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 1446 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 1488
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 264 SISDTDRPRICDD---DY*CPSSAGYQDSSPN*PSFPCR 157
S++D + C+D Y C GY D+SPN P R
Sbjct: 387 SLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGR 425
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 258 SDTDRPRIC----DDDY*CPSSAGYQDSSPN 178
+D DR C DDDY C G++D SP+
Sbjct: 1184 NDCDRNARCIQIGDDDYSCACPPGFKDKSPS 1214
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 237 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 109
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 264 SISDTDRPRICDD---DY*CPSSAGYQDSSPN*PSFPCR 157
S++D + C+D Y C GY D+SPN P R
Sbjct: 971 SLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGR 1009
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 258 SDTDRPRIC----DDDY*CPSSAGYQDSSPN 178
+D DR C DDDY C G++D SP+
Sbjct: 1768 NDCDRNARCIQIGDDDYSCACPPGFKDKSPS 1798
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 257 EIETNILREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKA 385
E++ L+E F+P G+I+ C L KG+AF+ + A
Sbjct: 126 EVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLISNA 161
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 344 KSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
+ +AFV F DAE A++A +G R IR ++
Sbjct: 44 RGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 344 KSKGYAFVSFVKKADAEAAIQAMNGQLLGSRSIRTNWS 457
+ +AFV F DAE A++A +G R IR ++
Sbjct: 44 RGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 237 ICDD---DY*CPSSAGYQDSSPN*PSFPCRGPLACSWRPALWPPPC 109
IC D Y C SA + D SP+ S P R C RP PP C
Sbjct: 2030 ICQDLPQGYTCQCSADFVDVSPHRASHPGR---LCQPRPTPPPPEC 2072
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 264 SISDTDRPRICDD---DY*CPSSAGYQDSSPN*PSFPCR 157
S++D + C+D Y C GY D+SPN P R
Sbjct: 971 SLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGR 1009
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 258 SDTDRPRIC----DDDY*CPSSAGYQDSSPN 178
+D DR C DDDY C G++D SP+
Sbjct: 1768 NDCDRNARCIQIGDDDYSCACPPGFKDKSPS 1798
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 352 GLCFCIICKESRCRSCHPGNE 414
G C CKE C++C P NE
Sbjct: 111 GKSVCEDCKEHECKACEPPNE 131
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 341 LKSKGYAFVSFVKKADAEAAIQAMNG-QLLGSRSI 442
+ G+ FV F + DA+ A+ +NG +L G R I
Sbjct: 32 IMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVI 66
>Z81473-1|CAB03897.1| 302|Caenorhabditis elegans Hypothetical
protein C17D12.1a protein.
Length = 302
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 473 LVVYALTSSYVWILIPATGHSLPGWQLRH 387
L+ YA +W+L+P GHS+ W + H
Sbjct: 18 LIAYADYVILIWLLLPTFGHSI--WTVFH 44
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 362 FVSFVKKADAEAAIQAMNGQLLGSRSI 442
FV F A A A MNG+ G RS+
Sbjct: 330 FVEFTNNAQAIKAFVMMNGRFFGGRSV 356
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 353 GYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
G+AFV F DAE A ++G+ + S+R
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMR 66
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 353 GYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
G+AFV F DAE A ++G+ + S+R
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMR 66
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 353 GYAFVSFVKKADAEAAIQAMNGQLLGSRSIR 445
G+AFV F DAE A ++G+ + S+R
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMR 66
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 159 DKEMKVNWATSPGNQPKTDTSNHHHIFVGDLYQKSKQTYSERPSL 293
D + + + + QPK T HH++ + + YSE+ ++
Sbjct: 208 DDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTI 252
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 159 DKEMKVNWATSPGNQPKTDTSNHHHIFVGDLYQKSKQTYSERPSL 293
D + + + + QPK T HH++ + + YSE+ ++
Sbjct: 227 DDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTI 271
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +3
Query: 159 DKEMKVNWATSPGNQPKTDTSNHHHIFVGDLYQKSKQTYSERPSL 293
D + + + + QPK T HH++ + + YSE+ ++
Sbjct: 253 DDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTI 297
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 350 KGYAFVSFVKKADAEAAIQAMNG-QLLGSRSIRTN 451
KGY F+ F+ +A + +NG ++ G + IR N
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFN 142
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN-GQLLG 430
L F FG++S CR+V + + FV+ + ADA+ + +N G L+G
Sbjct: 29 LFHVFQNFGKVSYCRVVGQSNDGQVQ-LGFVNMMSVADADEVRKNLNDGNLIG 80
>AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical
protein Y42A5A.4 protein.
Length = 353
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -3
Query: 398 QLRH--LLSLQMIQKHNPWI*ALMDRVLCDSSISHQMERRPLGV 273
QL+H L+ L + K N + + + LCD ++ H++E+ P GV
Sbjct: 57 QLKHQNLVGLIEVFKRNRKLHLVFE--LCDRTVLHELEKNPHGV 98
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 275 LREAFAPFGEISNCRIVRDPLTLKSKGYAFVSFVKKADAEAAIQAMN-GQLLG 430
L F FG++S CR+V + + FV+ + ADA+ + +N G L+G
Sbjct: 29 LFHVFQNFGKVSYCRVVGQSNDGQVQ-LGFVNMMSVADADEVRKNLNDGNLIG 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,178,277
Number of Sequences: 27780
Number of extensions: 252926
Number of successful extensions: 941
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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