Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30689
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061253-1|AAL28801.1|  334|Drosophila melanogaster LD18835p pro...    29   5.4  
AE014297-3115|AAF55968.1|  334|Drosophila melanogaster CG7080-PA...    29   5.4  
AY119006-1|AAM50866.1|  445|Drosophila melanogaster LP03361p pro...    29   9.5  
AE014296-2557|AAF49596.1|  445|Drosophila melanogaster CG7604-PA...    29   9.5  

>AY061253-1|AAL28801.1|  334|Drosophila melanogaster LD18835p
           protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 25/92 (27%), Positives = 35/92 (38%)
 Frame = +1

Query: 463 YSCEFVWASDDWEECIRHAVATVFKNDNCSVFHSKRKQCYRGREVYSKHSVSTSHCASVV 642
           Y  E   A   +E+   H V  +F+      +H   +Q        +   VS ++ A  V
Sbjct: 53  YGLETQRAPAIYEDYQTHIVQ-LFQQRQVPQYHQAPRQQLHTSSYQNPLLVSANYQAGTV 111

Query: 643 QKPANNPPAPWQPLFPLGPGLTWRGSKPLGNP 738
                 P AP QPL   GP      S+PL  P
Sbjct: 112 SLAPPAPAAPAQPLTSYGPPHLQHQSQPLQPP 143


>AE014297-3115|AAF55968.1|  334|Drosophila melanogaster CG7080-PA
           protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 25/92 (27%), Positives = 35/92 (38%)
 Frame = +1

Query: 463 YSCEFVWASDDWEECIRHAVATVFKNDNCSVFHSKRKQCYRGREVYSKHSVSTSHCASVV 642
           Y  E   A   +E+   H V  +F+      +H   +Q        +   VS ++ A  V
Sbjct: 53  YGLETQRAPAIYEDYQTHIVQ-LFQQRQVPQYHQAPRQQLHTSSYQNPLLVSANYQAGTV 111

Query: 643 QKPANNPPAPWQPLFPLGPGLTWRGSKPLGNP 738
                 P AP QPL   GP      S+PL  P
Sbjct: 112 SLAPPAPAAPAQPLTSYGPPHLQHQSQPLQPP 143


>AY119006-1|AAM50866.1|  445|Drosophila melanogaster LP03361p
           protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +1

Query: 526 TVFKNDNCSVFHSKRKQCYRGREVYSKHSVSTSHCASVVQKPAN-NPPAPWQPLFPLGP 699
           T  K D CS   +K      G  + +  + S + C  V   P   NP  PW P FP GP
Sbjct: 333 TTKKPDECS---TKPSGWNPGGPIVTIPTTSRTPCGCVSWNPPGWNPGGPWPPTFP-GP 387


>AE014296-2557|AAF49596.1|  445|Drosophila melanogaster CG7604-PA
           protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +1

Query: 526 TVFKNDNCSVFHSKRKQCYRGREVYSKHSVSTSHCASVVQKPAN-NPPAPWQPLFPLGP 699
           T  K D CS   +K      G  + +  + S + C  V   P   NP  PW P FP GP
Sbjct: 333 TTKKPDECS---TKPSGWNPGGPIVTIPTTSRTPCGCVSWNPPGWNPGGPWPPTFP-GP 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,016,833
Number of Sequences: 53049
Number of extensions: 932695
Number of successful extensions: 2897
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2897
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)