Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30684
         (831 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein.               33   1.3  
U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein.               33   1.3  
BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1 (chi...    33   1.3  
AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 vari...    33   1.3  

>U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein.
          Length = 1461

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 779 LSEKSGTGPSFLLLEVQNGKESLVIWEPPGP 687
           LS+     P  L LEV+N K  ++ W+PP P
Sbjct: 629 LSDVPSAAPQNLSLEVRNSKSIMIHWQPPAP 659


>U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein.
          Length = 1461

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 779 LSEKSGTGPSFLLLEVQNGKESLVIWEPPGP 687
           LS+     P  L LEV+N K  ++ W+PP P
Sbjct: 629 LSDVPSAAPQNLSLEVRNSKSIMIHWQPPAP 659


>BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1
           (chicken) protein.
          Length = 1461

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 779 LSEKSGTGPSFLLLEVQNGKESLVIWEPPGP 687
           LS+     P  L LEV+N K  ++ W+PP P
Sbjct: 629 LSDVPSAAPQNLSLEVRNSKSIMIHWQPPAP 659


>AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 variant
           protein.
          Length = 1130

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 779 LSEKSGTGPSFLLLEVQNGKESLVIWEPPGP 687
           LS+     P  L LEV+N K  ++ W+PP P
Sbjct: 325 LSDVPSAAPQNLSLEVRNSKSIMIHWQPPAP 355


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,758,910
Number of Sequences: 237096
Number of extensions: 3884610
Number of successful extensions: 10322
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10321
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)