Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30680
(793 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 25 0.92
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 23 3.7
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 3.7
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 3.7
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 3.7
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 8.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.5
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 24.6 bits (51), Expect = 0.92
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 410 PNPTVVGLSRPTMSNPAGRAITDGDVPGLTGP 505
P PT+ RP + P DG P T P
Sbjct: 400 PEPTISTTPRPEWARPPSTPSADGSKPVQTTP 431
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 34 FQNRKPTLRQELRGIS*RPEDQGAASRRE 120
FQNR+ L++ELR + +Q R E
Sbjct: 54 FQNRRMKLKKELRAVK-EINEQARREREE 81
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 784 LINKYLWSNCKLENGGLK 731
++N+Y+ CKL NG K
Sbjct: 197 VVNQYIKQVCKLNNGHYK 214
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 784 LINKYLWSNCKLENGGLK 731
++N+Y+ CKL NG K
Sbjct: 22 VVNQYIKQVCKLNNGHYK 39
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 34 FQNRKPTLRQELRGIS*RPEDQGAASRRE 120
FQNR+ L++ELR + +Q R E
Sbjct: 205 FQNRRMKLKKELRAVK-EINEQARREREE 232
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 34 FQNRKPTLRQELRGIS*RPEDQGAASRRE 120
FQNR+ L++ELR + +Q R E
Sbjct: 264 FQNRRMKLKKELRAVK-EINEQARREREE 291
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -3
Query: 140 PRHCP*FSLRLAAP*SSGRQLMPRNSWRSVGFRFWK 33
P C + A SS L P +SW + F+K
Sbjct: 2347 PSLCTHINYGFAVLDSSSMTLKPHDSWADIDNEFYK 2382
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 463 HAWIWLLWLL 472
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 463 HAWIWLLWLL 472
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 463 HAWIWLLWLL 472
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 463 HAWIWLLWLL 472
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 217 HAWIWLVWLL 226
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 450 HAWIWLVWLL 459
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 424 HCWIWSFWNL 395
H WIW W L
Sbjct: 450 HAWIWLVWLL 459
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,180
Number of Sequences: 336
Number of extensions: 3431
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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