Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30680
         (793 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY941960-1|AAY33309.1|  124|Homo sapiens anti-rabies virus immun...    33   1.2  
AY941910-1|AAY33259.1|  124|Homo sapiens anti-rabies virus immun...    33   1.2  
AY941851-1|AAY33200.1|  124|Homo sapiens anti-rabies virus immun...    33   1.2  

>AY941960-1|AAY33309.1|  124|Homo sapiens anti-rabies virus
           immunoglobulin heavy chain variable region protein.
          Length = 124

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 505 RSCESWDIPIRYCSPSRIAHCGTAQTNHCWIWSFW 401
           RS  S D  + YC+  R+A+CG      C+ W +W
Sbjct: 84  RSLRSDDTAVYYCARDRLAYCG----GDCYSWDYW 114


>AY941910-1|AAY33259.1|  124|Homo sapiens anti-rabies virus
           immunoglobulin heavy chain variable region protein.
          Length = 124

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 505 RSCESWDIPIRYCSPSRIAHCGTAQTNHCWIWSFW 401
           RS  S D  + YC+  R+A+CG      C+ W +W
Sbjct: 84  RSLRSDDTAVYYCARDRLAYCG----GDCYSWDYW 114


>AY941851-1|AAY33200.1|  124|Homo sapiens anti-rabies virus
           immunoglobulin heavy chain variable region protein.
          Length = 124

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 505 RSCESWDIPIRYCSPSRIAHCGTAQTNHCWIWSFW 401
           RS  S D  + YC+  R+A+CG      C+ W +W
Sbjct: 84  RSLRSDDTAVYYCARDRLAYCG----GDCYSWDYW 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,098,538
Number of Sequences: 237096
Number of extensions: 2063315
Number of successful extensions: 7897
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7897
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)