Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30680
         (793 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p pro...    38   0.012
AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA...    38   0.012
AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p pro...    33   0.34 
AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA ...    33   0.34 
AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA...    33   0.59 
AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p pro...    30   4.2  
AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA...    30   4.2  

>AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p
           protein.
          Length = 233

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +2

Query: 5   DLTVVDGISFSKTGSPRSARSYEA--LADDPKIREQQVEERIMDNVVDFLDSHVLQLRMP 178
           D+ + +GI+  KT      RS     L ++ + RE +V+  +++ V  F  +H LQ ++P
Sbjct: 58  DVRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVP 117

Query: 179 KYFEED-NSVEEEGRG 223
           K   +D     EE RG
Sbjct: 118 KDSIQDMQRALEESRG 133


>AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA
           protein.
          Length = 233

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +2

Query: 5   DLTVVDGISFSKTGSPRSARSYEA--LADDPKIREQQVEERIMDNVVDFLDSHVLQLRMP 178
           D+ + +GI+  KT      RS     L ++ + RE +V+  +++ V  F  +H LQ ++P
Sbjct: 58  DVRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVP 117

Query: 179 KYFEED-NSVEEEGRG 223
           K   +D     EE RG
Sbjct: 118 KDSIQDMQRALEESRG 133


>AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p
           protein.
          Length = 306

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 80  ADDPKIREQQVEERIMDNVVDFLDSHVLQLRMPKYF 187
           A+  + R    EER+ D++  +L SH L+++ P+YF
Sbjct: 81  AEKVESRSMNPEERLFDDIDSYLGSHSLRIQAPEYF 116


>AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA
           protein.
          Length = 306

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 80  ADDPKIREQQVEERIMDNVVDFLDSHVLQLRMPKYF 187
           A+  + R    EER+ D++  +L SH L+++ P+YF
Sbjct: 81  AEKVESRSMNPEERLFDDIDSYLGSHSLRIQAPEYF 116


>AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA
           protein.
          Length = 274

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
 Frame = +2

Query: 2   KDLTVVDGISFSKTG--------SPRSARSYEA-LADDPKIREQQVEERIMDNVVDFLDS 154
           K L++++GI F  +G        +P S +  EA L      +EQ +   I+  V +FL  
Sbjct: 93  KSLSLMEGIQFVSSGGESEETKRAPISEKDIEAVLPRSVDAKEQVLNNMILKRVGNFLQD 152

Query: 155 HVLQLRMPKYFEEDNSVE 208
           H LQ+   K+  E NSVE
Sbjct: 153 HTLQV---KFDNEANSVE 167


>AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p protein.
          Length = 1824

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +2

Query: 104  QQVEERIMDNVVDF-----LDSHVLQLRMPKYFEEDNSVEEEGRG 223
            +Q+  RI DN++DF     + + VLQ    K   E+ S E +G G
Sbjct: 1508 EQLPSRIRDNMIDFYRRYNIPARVLQKTKQKQLVEEESEENQGHG 1552


>AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA
            protein.
          Length = 1824

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +2

Query: 104  QQVEERIMDNVVDF-----LDSHVLQLRMPKYFEEDNSVEEEGRG 223
            +Q+  RI DN++DF     + + VLQ    K   E+ S E +G G
Sbjct: 1508 EQLPSRIRDNMIDFYRRYNIPARVLQKTKQKQLVEEESEENQGHG 1552


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,899,998
Number of Sequences: 53049
Number of extensions: 616629
Number of successful extensions: 1361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)