Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30677
(483 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 100 9e-22
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 100 9e-22
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 100 9e-22
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 100 1e-21
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 100 1e-21
BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p pro... 31 0.83
AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA... 31 0.83
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 30 1.9
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 30 1.9
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 29 2.5
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 29 2.5
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 29 2.5
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 29 2.5
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 100 bits (240), Expect = 9e-22
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 232
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 233 KLSSMPV 253
KLSSMPV
Sbjct: 61 KLSSMPV 67
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 100 bits (240), Expect = 9e-22
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 232
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 233 KLSSMPV 253
KLSSMPV
Sbjct: 61 KLSSMPV 67
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 100 bits (240), Expect = 9e-22
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 232
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 233 KLSSMPV 253
KLSSMPV
Sbjct: 61 KLSSMPV 67
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 100 bits (239), Expect = 1e-21
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +2
Query: 53 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 232
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 233 KLSSMPV 253
KLSSMPV
Sbjct: 61 KLSSMPV 67
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 100 bits (239), Expect = 1e-21
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +2
Query: 53 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 232
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 233 KLSSMPV 253
KLSSMPV
Sbjct: 61 KLSSMPV 67
>BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p
protein.
Length = 994
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 12 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 113
++AL +C LGL+ C+T + W+A+P P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816
>AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA
protein.
Length = 988
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 12 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 113
++AL +C LGL+ C+T + W+A+P P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 261 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 82
++ST S S + S STS P S+ T S S +S + STS+ PST
Sbjct: 38 NSSTPSTSSSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPST 97
Query: 81 AS 76
+S
Sbjct: 98 SS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 261 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 82
++ST S S + S STS P S+ T S S +S + STS+ PST
Sbjct: 38 NSSTPSTSSSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPST 97
Query: 81 AS 76
+S
Sbjct: 98 SS 99
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 202 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 92
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 202 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 92
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 202 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 92
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 202 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 92
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,978,878
Number of Sequences: 53049
Number of extensions: 239762
Number of successful extensions: 925
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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