SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30676
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16GI3 Cluster: Putative uncharacterized protein; n=1; ...    46   0.001
UniRef50_UPI0000E47A23 Cluster: PREDICTED: similar to MKL/myocar...    39   0.13 
UniRef50_Q2QYW0 Cluster: Putative uncharacterized protein; n=1; ...    39   0.13 
UniRef50_Q2JCT0 Cluster: Transcriptional regulator, LuxR family;...    38   0.29 
UniRef50_A0ND82 Cluster: ENSANGP00000031939; n=2; Anopheles gamb...    37   0.51 
UniRef50_UPI0000D5586B Cluster: PREDICTED: similar to CG8927-PA,...    36   0.67 
UniRef50_Q386M2 Cluster: Putative uncharacterized protein; n=1; ...    36   0.67 
UniRef50_Q3E0R4 Cluster: PBS lyase HEAT-like repeat; n=2; Chloro...    35   2.1  
UniRef50_A7D679 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q5FRI3 Cluster: DNA mismatch repair protein MutL; n=2; ...    34   2.7  
UniRef50_Q6BMH0 Cluster: Debaryomyces hansenii chromosome F of s...    34   2.7  
UniRef50_Q0USP8 Cluster: Predicted protein; n=1; Phaeosphaeria n...    34   2.7  
UniRef50_Q9DYE3 Cluster: Membrane virion glycoprotein 150; n=2; ...    34   3.6  
UniRef50_UPI0000E49D89 Cluster: PREDICTED: hypothetical protein;...    33   4.8  
UniRef50_Q2LUR5 Cluster: DNA mismatch repair protein mutL; n=1; ...    33   4.8  
UniRef50_Q9VR13 Cluster: CG15635-PA; n=2; Drosophila melanogaste...    33   4.8  
UniRef50_Q0U329 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   4.8  
UniRef50_A7QMX4 Cluster: Chromosome undetermined scaffold_129, w...    33   6.3  
UniRef50_UPI00015B6424 Cluster: PREDICTED: similar to CG8146-PA;...    33   8.3  
UniRef50_UPI0000DB7BD4 Cluster: PREDICTED: similar to Suppressor...    33   8.3  
UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n...    33   8.3  
UniRef50_Q2JQ30 Cluster: Putative uncharacterized protein; n=2; ...    33   8.3  
UniRef50_Q09BN6 Cluster: FHA domain protein; n=1; Stigmatella au...    33   8.3  
UniRef50_Q9VM59 Cluster: CG9200-PA; n=2; Sophophora|Rep: CG9200-...    33   8.3  
UniRef50_Q9BLJ2 Cluster: Ci-META2; n=10; Ciona intestinalis|Rep:...    33   8.3  
UniRef50_Q4N5C9 Cluster: ATP-dependent protease, putative; n=2; ...    33   8.3  

>UniRef50_Q16GI3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 333

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 42  LLISMLFALTAYAQNDSPIPPRLQIPGAIPVGGPVRQG-GFRQGRIAPVPGSIPRVRRPG 218
           LLI +L  ++       P PPR+ IPGAIP+  PV +G   R+ R+ P    + RVRRPG
Sbjct: 6   LLIPLLGLVSLATAQYGPAPPRINIPGAIPL--PVVRGIPIREERVLPPQPQVLRVRRPG 63


>UniRef50_UPI0000E47A23 Cluster: PREDICTED: similar to
           MKL/myocardin-like protein 2 (Myocardin-related
           transcription factor B) (MRTF-B) (Megakaryoblastic
           leukemia 2); n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MKL/myocardin-like protein 2
           (Myocardin-related transcription factor B) (MRTF-B)
           (Megakaryoblastic leukemia 2) - Strongylocentrotus
           purpuratus
          Length = 1034

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
 Frame = +3

Query: 249 ASLVQIFSHLMNLRNLLLKNQKMNTKLTLLQLFRPAATLHPNLKMTSTTSPPLLSQNH-- 422
           A+ ++I  +  N  NLLL  Q++  +L LLQ       L PN    STTS  LLS NH  
Sbjct: 212 ANKLEIPPNASNPYNLLLMQQQLLLQLQLLQQQHHQLIL-PNAPNISTTSSKLLSSNHGS 270

Query: 423 --P*SLTRSHNLLLAPVQARSHPSHAIQTRLTQHLSTL 530
             P S T + +    P   +S  ++  +TR+  +L  +
Sbjct: 271 QSPSSTTVTSSSSPTPQDNKSSVANCTKTRILSNLEDM 308


>UniRef50_Q2QYW0 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 433

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = +3

Query: 351 PAATLHPNLKMTSTTSP--PLLSQNHP*SLTRSHNLLLAPVQARSHPSHAIQTRLTQHLS 524
           P  T +PN++  ST       L Q H  ++T+  N   A  +A  HP H   T L   L 
Sbjct: 97  PPVTHYPNMRPWSTQCDLTDKLQQQHTVTMTKKKNPYAAAAEASKHPQH---TALGSFLL 153

Query: 525 TLSGKRNQLTKPSNLAQNLTN 587
           +LSG   +L +  +L +++T+
Sbjct: 154 SLSGDGEKLDRLRHLLRSITD 174


>UniRef50_Q2JCT0 Cluster: Transcriptional regulator, LuxR family;
           n=1; Frankia sp. CcI3|Rep: Transcriptional regulator,
           LuxR family - Frankia sp. (strain CcI3)
          Length = 357

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 81  QNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRI-APVPGSIPRVRRPGFARPSFKSVDASL 257
           Q   P+  R+ + G +PV G V   G  Q  I   VPG++P  R PG  R S +     L
Sbjct: 198 QGGVPVQGRVPVQGRVPVQGGVPVEGRVQVPIQGGVPGAVPFPRMPGLPRESLRLAYREL 257

Query: 258 VQIFSHL 278
            ++  H+
Sbjct: 258 QEVTEHV 264


>UniRef50_A0ND82 Cluster: ENSANGP00000031939; n=2; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000031939 - Anopheles gambiae
           str. PEST
          Length = 333

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 45  LISMLFALTAYAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVPG-SIPRVRRPGF 221
           L+ +   +T       P PPRL IPGAIP+  P+     R+ R+ P     + RVRRPG 
Sbjct: 7   LLPLAGLITLATAQYGPAPPRLNIPGAIPL-PPI-----REERLLPQQSPQVIRVRRPGA 60

Query: 222 AR 227
            R
Sbjct: 61  VR 62


>UniRef50_UPI0000D5586B Cluster: PREDICTED: similar to CG8927-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG8927-PA, isoform A - Tribolium castaneum
          Length = 308

 Score = 36.3 bits (80), Expect = 0.67
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +3

Query: 39  TLLISMLFALTAYAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRP 215
           T +  +LF +T    +   +PPRL IPGAI V    R   FRQ RI    G  PR+RRP
Sbjct: 5   TCVTCLLFFITL---SSGQLPPRLNIPGAILV-PQGRPAPFRQQRIQN-EGPPPRLRRP 58


>UniRef50_Q386M2 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 643

 Score = 36.3 bits (80), Expect = 0.67
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 24  GSIMRTLLISMLFALTAYAQNDSPIPPRLQIPGAIPVGGPVRQGG 158
           GS   T   ++L   T  A  D+P P  + IPG +P+G P   GG
Sbjct: 507 GSATTTSPSTLLVPATGVAPVDAPAPAPIPIPGPLPLGAPAAPGG 551


>UniRef50_Q3E0R4 Cluster: PBS lyase HEAT-like repeat; n=2;
           Chloroflexus|Rep: PBS lyase HEAT-like repeat -
           Chloroflexus aurantiacus J-10-fl
          Length = 1227

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = +3

Query: 216 GFARPSFKSVDASL--VQIFSHLMNLRNLLLKNQKMNTKLTLLQLFRPAATLHPNLKMTS 389
           GFA     ++D  L  +++   L N  +LL +  +  T+  +++        H    ++ 
Sbjct: 588 GFALSQRLTLDLRLRAIRLLHRLSNGLSLLKRLLQTETEPVIVRAAAAYQLTHYPQAVSV 647

Query: 390 TTSPPLLSQNHP*SLTRSHNLLLAPVQARSHPSH-AIQTRLTQHL 521
            T  P LS +HP  L R+    L  + A++HP+  A +T L QHL
Sbjct: 648 LT--PFLSPHHPPLLRRAAGYALGQIAAQNHPAAVAARTALIQHL 690


>UniRef50_A7D679 Cluster: Putative uncharacterized protein; n=1;
           Halorubrum lacusprofundi ATCC 49239|Rep: Putative
           uncharacterized protein - Halorubrum lacusprofundi ATCC
           49239
          Length = 301

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -3

Query: 493 AWDGWDLA*TGARRRLWERVKDYGWFWLRSGGDVVEVILRF 371
           AW  W+LA +G    LW+R+  Y    LR+G DV   I R+
Sbjct: 66  AWAAWELARSGYAWNLWDRLNLYVVEDLRAGSDVALTIERY 106


>UniRef50_Q5FRI3 Cluster: DNA mismatch repair protein MutL; n=2;
           Acetobacteraceae|Rep: DNA mismatch repair protein MutL -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 619

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 93  PIPPR-LQIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRPGFAR--PSF 236
           P PP   + P +IP+ G +  G     R +P+PG+ P + RPGFA   P+F
Sbjct: 355 PRPPEPREAPASIPLQGSLPTG--YAPRSSPLPGATPSLARPGFAETDPAF 403


>UniRef50_Q6BMH0 Cluster: Debaryomyces hansenii chromosome F of
           strain CBS767 of Debaryomyces hansenii; n=4;
           Saccharomycetales|Rep: Debaryomyces hansenii chromosome
           F of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 1052

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3

Query: 237 KSVDASLVQIFSHLMNLRNLLLKNQKMNTKLT 332
           + +DA +VQ+F HL+N+ N ++ N +  T+LT
Sbjct: 174 RELDAIIVQVFPHLLNIGNSIIANSENMTELT 205


>UniRef50_Q0USP8 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 1521

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 354 AATLHPNLKMTSTTSPPLLSQNHP*SLTRSHNLLLAPVQARSHPSHAIQTRLTQHLSTLS 533
           +A + P + +   T+   +S  H    T+SH      V ARS PS  I T  T+  + L 
Sbjct: 316 SAKIRPEVVIEFGTTKGKVSAGHVSVSTKSHRRRFDDVDARSAPSDTIHTVRTELDAALE 375

Query: 534 GKRNQLTKPSNLA 572
              N +   SN+A
Sbjct: 376 SHMNSVDDKSNIA 388


>UniRef50_Q9DYE3 Cluster: Membrane virion glycoprotein 150; n=2;
           Gammaherpesvirinae|Rep: Membrane virion glycoprotein 150
           - Murine herpesvirus 72
          Length = 483

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 254 TRPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQP 415
           T P  Q  D+P KP   +P+ E + N+P+    +  ST +P +   ++T  ++P
Sbjct: 222 TSPPKQE-DDPVKPTESKPQAEPKDNSPSDVPGTADSTTDPASPTVELTPPTEP 274


>UniRef50_UPI0000E49D89 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 779

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQN 382
           P L+ L +    V E+PE+E+EI  P +F     + P P N
Sbjct: 385 PTLEGLRKRTLAVNEDPEEEFEIPDPGSFYPQPPNLPPPDN 425


>UniRef50_Q2LUR5 Cluster: DNA mismatch repair protein mutL; n=1;
           Syntrophus aciditrophicus SB|Rep: DNA mismatch repair
           protein mutL - Syntrophus aciditrophicus (strain SB)
          Length = 616

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +3

Query: 171 RIAPVPGSIPRVRRPGFA-RPSFKSVDASLVQIFSHLMNLRNLLLKNQKMNTKLTLLQLF 347
           R+ P+ G   RVR  GFA RP F       +  F +  ++R+ LL +  M     +++  
Sbjct: 221 RLQPIEGETDRVRVTGFASRPDFTCATTRQIYTFVNRRHVRDHLLNHAVMTAYRRVIEPR 280

Query: 348 R-PAATLHPNL 377
           R PA  L+ +L
Sbjct: 281 RYPAVVLYVDL 291


>UniRef50_Q9VR13 Cluster: CG15635-PA; n=2; Drosophila
            melanogaster|Rep: CG15635-PA - Drosophila melanogaster
            (Fruit fly)
          Length = 1118

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 120  GAIPVGGPVRQGGFRQGRIAP-----VPGSIPRVRRPGFAR 227
            G+IP  GP+ QGG   G + P      PGSIP +R P   R
Sbjct: 998  GSIPPSGPLTQGGHPPGSLLPPNTGLPPGSIPPLRPPNQGR 1038


>UniRef50_Q0U329 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 498

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 284 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 418
           PA    E  E+  E + PT+     + TPEPQ D   +T  +  K
Sbjct: 150 PASTTAEATEEAVEDDAPTSTQEEEFHTPEPQADAVHVTPATSKK 194


>UniRef50_A7QMX4 Cluster: Chromosome undetermined scaffold_129,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_129, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 184

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 126 IPVGGPVRQGGFRQGRIAPVPGSIPRVRRPGFARPSFKSVDASLVQIFS 272
           I +GG V + G+  G ++P P S+P +  P F  P F     ++   FS
Sbjct: 128 IEIGGGVERSGWFPGILSPGPSSLPAI-SPNFFSPGFDPYSLNIFHDFS 175


>UniRef50_UPI00015B6424 Cluster: PREDICTED: similar to CG8146-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG8146-PA - Nasonia vitripennis
          Length = 944

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 442 ERVKDYGWFWLRSGGDVVEVIL 377
           E+VKDYGW+W    G+  E IL
Sbjct: 752 EKVKDYGWYWGPISGEAAEKIL 773


>UniRef50_UPI0000DB7BD4 Cluster: PREDICTED: similar to Suppressor of
           Cytokine Signaling at 16D CG8146-PA, partial; n=1; Apis
           mellifera|Rep: PREDICTED: similar to Suppressor of
           Cytokine Signaling at 16D CG8146-PA, partial - Apis
           mellifera
          Length = 804

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 442 ERVKDYGWFWLRSGGDVVEVIL 377
           E+VKDYGW+W    G+  E IL
Sbjct: 613 EKVKDYGWYWGPISGEAAEKIL 634


>UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB3857 UniRef100
           entry - Canis familiaris
          Length = 420

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 19/39 (48%), Positives = 20/39 (51%)
 Frame = +3

Query: 102 PRLQIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRPG 218
           PR   PG    G PV  GG   GR   VP  +PR RRPG
Sbjct: 210 PRPTGPGPALPGDPVAPGGSPGGR---VPSLVPRPRRPG 245


>UniRef50_Q2JQ30 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain JA-2-3B'a(2-13))
           (Cyanobacteria bacteriumYellowstone B-Prime)
          Length = 512

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +3

Query: 90  SPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRP 215
           +P P     P A P   P RQ  F+ GR  P P  IP V  P
Sbjct: 401 TPTPTPTPTPEATPTLAPRRQPRFQLGRPRPTPEGIPAVPTP 442


>UniRef50_Q09BN6 Cluster: FHA domain protein; n=1; Stigmatella
           aurantiaca DW4/3-1|Rep: FHA domain protein - Stigmatella
           aurantiaca DW4/3-1
          Length = 609

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 260 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQ 379
           P L+  DEP+ P    PE E E+ TP    +SG S P P+
Sbjct: 120 PALRGSDEPSDPEGSAPEAETELETPVQDEASGPS-PGPE 158


>UniRef50_Q9VM59 Cluster: CG9200-PA; n=2; Sophophora|Rep: CG9200-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 356

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 180 PVPGSIPRVRRPGFARPSFK 239
           PVPG IP+ RRPG ++P  K
Sbjct: 192 PVPGRIPKHRRPGLSKPKIK 211


>UniRef50_Q9BLJ2 Cluster: Ci-META2; n=10; Ciona intestinalis|Rep:
           Ci-META2 - Ciona intestinalis (Transparent sea squirt)
          Length = 813

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 247 STDLKDGLAN-PGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGICSLGGIG 92
           +T L  GL + PG   LG  PG     P   PP ++ P  G  PG+  LGG+G
Sbjct: 121 NTGLPGGLGSLPG--GLGSFPGASQSFPICTPPAVS-PGIGGLPGLGGLGGLG 170


>UniRef50_Q4N5C9 Cluster: ATP-dependent protease, putative; n=2;
            Theileria|Rep: ATP-dependent protease, putative -
            Theileria parva
          Length = 1115

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +3

Query: 48   ISMLFALTAYAQNDSPIPPRLQIPGAIPVGGPV-RQGGFRQGRIAPVPGSIPRVRRPGFA 224
            I+M  AL + A     I P + + G + + G V R GG ++  IA +   I  V  P   
Sbjct: 1025 ITMASALISIAAKKR-IKPSIAMTGELTISGKVLRVGGIKEKLIAAIREDISTVIMPVGN 1083

Query: 225  RPSFKSVDASL 257
            +P F+ +D S+
Sbjct: 1084 KPDFEELDPSI 1094


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,765,744
Number of Sequences: 1657284
Number of extensions: 15910331
Number of successful extensions: 54300
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 50412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54176
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -