Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30676
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   1.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 81  QNDSPIPP--RLQIPGAIPVGGPVRQGGFRQGRIAPVPGSI 197
           QN++P+P   R+ +P  +  G P   GG +     P PGS+
Sbjct: 108 QNNNPLPSPRRVAVPVLVRDGKPCLSGGPKH----PDPGSL 144


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 53  YAVCFNSLCTK*LSYSTETTNTRSHSC 133
           Y  C+N   T+ L       N R+HSC
Sbjct: 115 YWTCWNGTATEQLCIGGLLYNERTHSC 141


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 609 SVKGSIGNWLNSGPGLKVLLIGFVF 535
           +V  ++ NW+N+G     L IG  F
Sbjct: 235 NVNSTVVNWVNAGADPGKLTIGLAF 259


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 263 NLQSLDEPAKPVTEEPEDEYEINTPTAFSSSG-YSTPEP 376
           N  S+ EP    T  PE     +TP+A  S    +TP+P
Sbjct: 395 NSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKP 433


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 668 GFLLPSSKKGFKFQ 627
           GFLL +SKK F F+
Sbjct: 194 GFLLYASKKQFTFE 207


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 536  KTKPINKTFKPGPEFNQFPIEPL 604
            KTKP   T KP       P EP+
Sbjct: 2207 KTKPKPTTMKPTTTIGYEPQEPV 2229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,673
Number of Sequences: 336
Number of extensions: 3830
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)