Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30676
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.41 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.2  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.0  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   6.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   8.8  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 462 PVQARSHPSHAIQTRLTQHLSTLSGKRNQL 551
           P Q  +HPS+     + +H+S L  K++++
Sbjct: 367 PPQPHTHPSYGSPAEIPKHISALGAKQSKM 396


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 225 RPSFKSVDASLVQIFSHLMNLRNLLLKNQKMNTKLTLLQ 341
           RP     DA  V+I   L  L ++ LKNQ M T L + Q
Sbjct: 40  RPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQ 78


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/58 (22%), Positives = 24/58 (41%)
 Frame = -3

Query: 466 TGARRRLWERVKDYGWFWLRSGGDVVEVILRFGCRVAAGRKSCRSVNFVFIFWFFSNR 293
           TG       R   +G    RSG   + +  R G  +  G +   +  F+F+  +F+ +
Sbjct: 374 TGMNSLRTVRASSFGPMRRRSGSPTLHIHCRRGLTIETGARCSTAAFFLFLARWFAQQ 431


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +3

Query: 366 HPNLKMTSTTSPPLLSQNHP*SLTRSHNLLLAPVQARSHPSHAIQTRLTQHLSTLSGKRN 545
           HP+  ++S  SP     +H   L   H+         SHP    Q +L+QH    SG+ +
Sbjct: 801 HPHSALSSH-SPVGAGSHH---LHHLHHHAAQQPPPGSHPGAQTQPQLSQHPPGASGRSS 856

Query: 546 QLTKP 560
            +  P
Sbjct: 857 AVITP 861


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +1

Query: 406 FSAKTTHNL*PVPTIFS*PLFKLDPIRPTQYRPVSPNTFQP 528
           F A  +H   P P       F +DP RP    P  P   +P
Sbjct: 156 FPAPISHR--PPPIAHQQAPFAMDPARPNPGMPPGPQMMRP 194



 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 242 GFKRRSGKSWSSYSRN*TRHRCYPSLPEAALPDWSSDRN 126
           G  R   + W+S SR   +H    + P++  PD   D +
Sbjct: 536 GGGREGSQEWNSRSRPPQQHSMLRTGPKSLAPDHEGDND 574


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 205 TLGIEPGTGAILPCLKPPCLTGPPTGMAP 119
           T  + PGT    P    P  T PPT  AP
Sbjct: 417 TSTVAPGTTTTTPTGANPGTTQPPTSDAP 445


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 535 PDRVERCWVRRVCIAWDGWD 476
           PDR   C +R + I+ D WD
Sbjct: 66  PDRDTMCLIRCIGISLDFWD 85


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 214  QDLPDRLLNPWMPHSSKSSVT 276
            QD  DR +NP++ H  + + T
Sbjct: 3049 QDQEDRKVNPYLKHHKRQTKT 3069


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 165 QGRIAPVPGSIPRVRRPGFAR 227
           +GR+  V G I R + PGF R
Sbjct: 168 RGRLGFVAGVIQREKMPGFER 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,180
Number of Sequences: 2352
Number of extensions: 15423
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)