Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30672
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -1

Query: 189 WLLPIIYVQSSYCRLVTFAVQASIWLICNLHTKNIRIK 76
           +++P+I +   YC +    +  +  L+ N H  NI ++
Sbjct: 246 FIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISLR 283


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 407 PFQNTIIKYVSISQND 360
           PFQ T  KY   S ND
Sbjct: 18  PFQGTTYKYTGCSDND 33


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 180 PIIYVQSSYCRLVTFAV 130
           PI+Y+  SYC +VT  +
Sbjct: 153 PILYLIFSYCPIVTTGI 169


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 213 INFFTHRIWLLPIIYVQSSYCRLVTFAVQASIWLICNLHT 94
           +N F+    L P++  +  YC+L++  +  +  L+ N HT
Sbjct: 73  VNAFSCYTVLAPVLCKRQQYCQLMS-KLLGNHQLVYNCHT 111


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 114 LICNLHTKNIRIKTVNAYTQ 55
           L+ N++TKN+R  T N  TQ
Sbjct: 56  LVLNVYTKNLRTDT-NRITQ 74


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 357 IIILTD*YIFYYCILEWSSKFVCFECI 437
           +IIL   Y FYY  + ++   +   CI
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVCI 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,051
Number of Sequences: 336
Number of extensions: 2196
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)