Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30672
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm rece...    29   2.4  
Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical p...    27   9.5  

>AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm
           receptor protein 148 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 10  WAFTGILRSIDCLMCLCVCVNSFNSNIFCV*ITY*PYRSLNG 135
           W F  I+ S++C+  + VC   F++ +FC    Y   +S +G
Sbjct: 192 WKFWEIMSSVECVCIIAVC---FSTILFCASNIYFTMKSASG 230


>Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical
           protein K06B4.9 protein.
          Length = 292

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 354 CIIILTD*YIFYYCILEWSSKFVCFECILSEICVKLFW 467
           CII     Y F  C L+++     FE   S+ C  L W
Sbjct: 131 CIIFCAVCYEFSKCFLKYNPNHWSFEFENSDFCDSLIW 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,067,750
Number of Sequences: 27780
Number of extensions: 184337
Number of successful extensions: 345
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)