Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30671
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 36 0.090
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 36 0.090
U59479-1|AAB03391.1| 99|Homo sapiens neutrophil protein protein. 36 0.090
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 36 0.090
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 36 0.090
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 34 0.27
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 34 0.27
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 32 1.1
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 32 1.5
AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle prefere... 31 2.6
AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein. 31 2.6
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 29 7.8
BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog (... 29 7.8
BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652... 29 7.8
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 29 7.8
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 29 7.8
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 29 7.8
AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein. 29 7.8
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 35.9 bits (79), Expect = 0.090
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ S+ D
Sbjct: 625 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 668
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 35.9 bits (79), Expect = 0.090
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ S+ D
Sbjct: 657 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 700
>U59479-1|AAB03391.1| 99|Homo sapiens neutrophil protein protein.
Length = 99
Score = 35.9 bits (79), Expect = 0.090
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ S+ D
Sbjct: 13 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 56
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 35.9 bits (79), Expect = 0.090
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ S+ D
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 674
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 35.9 bits (79), Expect = 0.090
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ S+ D
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 674
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 34.3 bits (75), Expect = 0.27
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ + D
Sbjct: 500 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGGSRD 543
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 34.3 bits (75), Expect = 0.27
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRKGKCCLQKGHLGIQNDHQSNSSVSAAD 228
+R R +GR H+RDR H++SV RK ++ G++ H+S+ + D
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGGSRD 674
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 421 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTKAT 248
ST S T S+ ++ + +A STT T + SAA + S T S +TT +T
Sbjct: 413 STTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSSSGTTPSPVTTTST 470
Score = 29.5 bits (63), Expect = 7.8
Identities = 26/100 (26%), Positives = 39/100 (39%)
Frame = -1
Query: 421 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTKATVX 242
ST ++T S+I++ + ++ STT T + SAA + S T S + T +T
Sbjct: 1152 STISASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVPTTSTTS 1211
Query: 241 XXXXXXXXXXXXXXPSGSGVAVSHWRFRAP*AIATQASTT 122
SG G S P T A+TT
Sbjct: 1212 ASTTSTTSAPTTSTTSGPGTTPS----PVPSTSITSAATT 1247
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -3
Query: 374 NRCRRKGRVHHRDRVHQKSVRRK 306
+R R +GR H+RDR H++SV RK
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK 653
>AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle
preferentially expressed protein protein.
Length = 3094
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 470 PPEPVEQRLPRIPAVGPPPET 532
PP P Q L + AVGPPP+T
Sbjct: 2695 PPTPPSQALSSLKAVGPPPQT 2715
>AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein.
Length = 2242
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 470 PPEPVEQRLPRIPAVGPPPET 532
PP P Q L + AVGPPP+T
Sbjct: 1843 PPTPPSQALSSLKAVGPPPQT 1863
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 29.5 bits (63), Expect = 7.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 421 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTKAT 248
ST T S+ ++ + +A STT T + SAA + S T S +TT +T
Sbjct: 237 STTSFPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVTTTST 294
>BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog
(Drosophila) protein.
Length = 1922
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 163 TSSGIQLLRSQRVTQEASALPLSAADTELLLWWS 264
TSS + LL + + Q+ ALPLS+A+ W S
Sbjct: 993 TSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWES 1026
>BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652
protein.
Length = 606
Score = 29.5 bits (63), Expect = 7.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 449 HIYVHVPPPEPVEQRLPRIPAVGPPPETF 535
H+++H P P +P +P + PPP F
Sbjct: 549 HLHIHPHPHHPHHLPIPPVPHLPPPPALF 577
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 163 TSSGIQLLRSQRVTQEASALPLSAADTELLLWWS 264
TSS + LL + + Q+ ALPLS+A+ W S
Sbjct: 983 TSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWES 1016
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 163 TSSGIQLLRSQRVTQEASALPLSAADTELLLWWS 264
TSS + LL + + Q+ ALPLS+A+ W S
Sbjct: 995 TSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWES 1028
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 163 TSSGIQLLRSQRVTQEASALPLSAADTELLLWWS 264
TSS + LL + + Q+ ALPLS+A+ W S
Sbjct: 993 TSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWES 1026
>AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein.
Length = 617
Score = 29.5 bits (63), Expect = 7.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 449 HIYVHVPPPEPVEQRLPRIPAVGPPPETF 535
H+++H P P +P +P + PPP F
Sbjct: 560 HLHIHPHPHHPHHLPIPPVPHLPPPPALF 588
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,926,221
Number of Sequences: 237096
Number of extensions: 1250119
Number of successful extensions: 4802
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4766
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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