Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30671
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 31 0.52
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 1.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 1.6
Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 3.7
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 4.8
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 4.8
U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 6.4
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTK 254
+T ST S TES+ TS T + ESTTE+ S S + ++ + + TT+
Sbjct: 209 TTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTE 268
Query: 253 AT 248
+T
Sbjct: 269 ST 270
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETES 329
ST +T S TES+ TS T + ESTTE+ S
Sbjct: 189 STTTTTATSTTESTSTSTDSTTTESTTESTTESTS 223
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETES 329
ST ST + TES+ TS T + ESTTE+ S
Sbjct: 241 STSTSTDSTTTESTSTSTDSTTTESTTESTTESTS 275
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 257
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 257
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 257
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 433 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 257
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical
protein W07A12.7 protein.
Length = 502
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 12 RDISKVGVVLIGY*INYHRVSSKRISL-VSSKHKMRAFVVLACVAMAYGALNLQWD 176
R +K G LIG + Y VSSK I + +SK R+ +++A +A Y L W+
Sbjct: 329 RPYTKCGPFLIGLLLGYITVSSKYIMVSTTSKTLFRSSLIVA-IATIYAILPEYWN 383
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 467 PPPEPVEQRLPRIPAVGPPP 526
PPP P+ +P+ P PPP
Sbjct: 202 PPPVPLTSNIPQAPPAPPPP 221
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 467 PPPEPVEQRLPRIPAVGPPP 526
PPP P+ +P+ P PPP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPP 207
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 467 PPPEPVEQRLPRIPAVGPPP 526
PPP P+ +P+ P PPP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPP 207
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 421 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 278
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 457 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 502
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 421 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 278
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 460 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 505
>U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical
protein C15H9.3 protein.
Length = 314
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = -1
Query: 529 FWGWTHSRDTRKSLLN-WFWGRYV--NIDVF-LYKRSTRVSTRISATESSITSEAQTAAA 362
FWGWT R+ K L+N +F+ YV I F L + ++S + S+ S ++A
Sbjct: 154 FWGWTEERN--KPLVNFFFYLNYVVQGIVFFCLGLTDILIVYKLSTIKESVFSNEKSATV 211
Query: 361 AKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTKATV 245
A E + + + V++ GN + + T SR++T+ V
Sbjct: 212 APAEMMQKMQ-VSVVNS--GNMMAPRKT--SRVSTELKV 245
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = -1
Query: 505 DTRKSLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETE 332
DT K+L++ + +++N D+FL++ T + E + T + + + T + E
Sbjct: 250 DTLKNLVHKY-SQFINFDIFLWQSKTEMVEEAVEEEPATTEDGAVEEEKEEKKTKKVE 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,286,102
Number of Sequences: 27780
Number of extensions: 169948
Number of successful extensions: 799
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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