Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30670
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   0.92 
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         25   2.8  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   3.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.9  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   8.6  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 580 ERSPPRYLLVVNGVLELKRSRRQRQSKLD*KAN 482
           ++ PPRYL V   + ELKR  +QR+ +L  + N
Sbjct: 696 QQKPPRYLQV--SMDELKRHTQQRREQLQRELN 726


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 310 DHSQQERGHSYDHRYRYWDDQRRFWGQF 393
           D  +QE G ++DH   +W   R F   F
Sbjct: 34  DEQKQELGLNFDHDGEFWMSYRDFTRYF 61


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 528 NGHAVSDKVNWIRKPTPKLSKSC*CRHLLEE 436
           +GHA+ D +  + +  P++ +   CRH  +E
Sbjct: 405 DGHALIDLLQRVDENPPEVGQKVLCRHPFQE 435


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 110  CLHFFRHFLYCFLFNSHKMTRGFLTHVFQS 21
            C   F HF Y F F+S      F   +F S
Sbjct: 945  CFRLFNHFYYLFDFDS--SLNSFRNRIFSS 972


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 391 IVPKIAFGHPN 359
           ++PK+AFG+P+
Sbjct: 47  VIPKVAFGYPD 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,356
Number of Sequences: 2352
Number of extensions: 16860
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)