Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30670
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   127   6e-30
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    78   5e-15
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    63   2e-10
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    63   2e-10
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...    63   2e-10
Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006607-1|AAY44022.1|  208|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  127 bits (307), Expect = 6e-30
 Identities = 73/114 (64%), Positives = 78/114 (68%)
 Frame = +3

Query: 126 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRMNLSRIRQNSIVAKSCT 305
           ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIR             K   
Sbjct: 6   ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 65

Query: 306 SRSFPTRTRALLRSSIPVLG*PKAILGTILGTIAKSGTKAFMEALQAGADISMI 467
            +  P +    L      +G  KA L   LGTIAKSGTKAFMEALQAGADISMI
Sbjct: 66  IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMI 119


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 48/115 (41%), Positives = 65/115 (56%)
 Frame = +3

Query: 117 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRMNLSRIRQNSIVAK 296
           ++ E   FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR+      +     +
Sbjct: 59  SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETE 118

Query: 297 SCTSRSFPTRTRALLRSSIPVLG*PKAILGTILGTIAKSGTKAFMEALQAGADIS 461
             + +    R   LL  +   +G  +  L   LGTIA+SGT  F+  L   A  S
Sbjct: 119 EMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSS 173


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 39/122 (31%), Positives = 64/122 (52%)
 Frame = +3

Query: 90  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRMNLSR 269
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K R   + 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRR--YAE 88

Query: 270 IRQNSIVAKSCTSRSFPTRTRALLRSSIPVLG*PKAILGTILGTIAKSGTKAFMEALQAG 449
           ++   +       R    + +  +      +G  +  L   LGTIAKSG+K F+E  +  
Sbjct: 89  LK-GDVAEGPSEIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 450 AD 455
           A+
Sbjct: 148 AE 149


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 39/122 (31%), Positives = 64/122 (52%)
 Frame = +3

Query: 90  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRMNLSR 269
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K R   + 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRR--YAE 88

Query: 270 IRQNSIVAKSCTSRSFPTRTRALLRSSIPVLG*PKAILGTILGTIAKSGTKAFMEALQAG 449
           ++   +       R    + +  +      +G  +  L   LGTIAKSG+K F+E  +  
Sbjct: 89  LK-GDVAEGPSEIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 450 AD 455
           A+
Sbjct: 148 AE 149


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 39/122 (31%), Positives = 64/122 (52%)
 Frame = +3

Query: 90  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRMNLSR 269
           +P +     +E +   FQAE   LM ++  + YS+ E+F+RELISN+SDAL+K R   + 
Sbjct: 31  VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRR--YAE 88

Query: 270 IRQNSIVAKSCTSRSFPTRTRALLRSSIPVLG*PKAILGTILGTIAKSGTKAFMEALQAG 449
           ++   +       R    + +  +      +G  +  L   LGTIAKSG+K F+E  +  
Sbjct: 89  LK-GDVAEGPSEIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147

Query: 450 AD 455
           A+
Sbjct: 148 AE 149


>Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical
           protein C01G12.7 protein.
          Length = 584

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = +1

Query: 289 WQRAVHQDHSQ-QERGHS-YDH-RYRYWDDQRRFWGQFWEPSRNL 414
           W R   +DHS  Q  GH  + H +  +W      W  +WE   N+
Sbjct: 28  WYRGDPRDHSNGQPNGHEMWGHGQIGWWQKDENGWHWYWEDESNM 72


>AC006607-1|AAY44022.1|  208|Caenorhabditis elegans Hypothetical
           protein C09E7.10 protein.
          Length = 208

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 261 DSS*FCLKRPMNWKSAHEGKFLCWS 187
           D S F   +  +W+ AHEG+ + WS
Sbjct: 81  DPSTFITLKENDWRDAHEGRMIIWS 105


>Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical
           protein T03D8.5 protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 637 KGGFTGLFWAGTVKRNLLAERSPPRYLLVVN 545
           + GF   FW GT  +N LA R+  ++L++ N
Sbjct: 222 RAGFASSFWNGTDGKNDLALRAARKFLVMDN 252


>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
           protein T05A7.11 protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 548 DDEQITWWGSFCKEVPFH 601
           DDE +T  G FCKE  FH
Sbjct: 67  DDEGVTINGKFCKESSFH 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,126,066
Number of Sequences: 27780
Number of extensions: 366267
Number of successful extensions: 960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)