Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30669
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.                35   0.21 
AB037721-1|BAA92538.1| 1820|Homo sapiens KIAA1300 protein protein.     30   4.5  
X65784-1|CAA46667.1|  142|Homo sapiens cell adhesion regulator p...    29   7.9  
X56585-1|CAA39923.1|  124|Homo sapiens choline acetyltransferase...    29   7.9  
BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.       29   7.9  
BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.       29   7.9  
BC021284-1|AAH21284.1|  632|Homo sapiens Unknown (protein for IM...    29   7.9  
AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein pr...    29   7.9  
AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens ...    29   7.9  
AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens ...    29   7.9  

>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
          Length = 1618

 Score = 34.7 bits (76), Expect = 0.21
 Identities = 19/37 (51%), Positives = 21/37 (56%)
 Frame = +3

Query: 162 VPPLPRTRRLSQAHHLRGGSAPSYHLRRRKSFDDQNL 272
           VPP P+ RR +QA  L GGSAP  HL      D Q L
Sbjct: 36  VPPSPQGRR-AQARGLFGGSAPGLHLEAAPDGDGQRL 71


>AB037721-1|BAA92538.1| 1820|Homo sapiens KIAA1300 protein protein.
          Length = 1820

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +2

Query: 14  PAPQAWSTMSAVTAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETV 193
           PAP    ++   T  +G   S  S TP+ S+  ++     R+L+ L+    P SP  E  
Sbjct: 418 PAPNHRGSLPVTTIFSGPKHSRSSPTPQFSVVGSS-----RSLQELNLSVEPPSPTDEDT 472

Query: 194 TGSSPAW 214
            G +  W
Sbjct: 473 QGPNRLW 479


>X65784-1|CAA46667.1|  142|Homo sapiens cell adhesion regulator
           protein.
          Length = 142

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -2

Query: 103 RQPRGYRRVGGDQASCSCDCAHRRPS 26
           R PRG R        CSC C H RPS
Sbjct: 29  RPPRGSRAFRLQTDPCSCRCLHDRPS 54


>X56585-1|CAA39923.1|  124|Homo sapiens choline acetyltransferase
           protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 112 KCPSKVPANTPSAKFWPFPRFPVPGDCHRLITCVEGQPRLITCEEGKVS 258
           K P K+ A TPS++    P+ PVP     L T ++    L++ E+ + S
Sbjct: 6   KVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMQHLVSEEQFRKS 54


>BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.
          Length = 1072

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  TAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETVTGSSP---AWRV 220
           T ++G +    +V P L+   N H  Y RTL  +S     A+    +V    P   AW  
Sbjct: 274 TPSSGPLDEEGAVAPVLA---NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGP 330

Query: 221 SPVLSPA 241
           SP   PA
Sbjct: 331 SPPTHPA 337


>BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.
          Length = 941

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  TAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETVTGSSP---AWRV 220
           T ++G +    +V P L+   N H  Y RTL  +S     A+    +V    P   AW  
Sbjct: 143 TPSSGPLDEEGAVAPVLA---NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGP 199

Query: 221 SPVLSPA 241
           SP   PA
Sbjct: 200 SPPTHPA 206


>BC021284-1|AAH21284.1|  632|Homo sapiens Unknown (protein for
           IMAGE:5017656) protein.
          Length = 632

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  TAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETVTGSSP---AWRV 220
           T ++G +    +V P L+   N H  Y RTL  +S     A+    +V    P   AW  
Sbjct: 384 TPSSGPLDEEGAVAPVLA---NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGP 440

Query: 221 SPVLSPA 241
           SP   PA
Sbjct: 441 SPPTHPA 447


>AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein
           protein.
          Length = 580

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +2

Query: 20  PQAWSTMSAVTAATGLISSNPSVT---PRLSLASNAHQKYQRTLRRLSSGRSPASPYPET 190
           P+AW+T S  TA+     S  S+T   PR S      ++  R   R S  R+P    P  
Sbjct: 163 PRAWATRSPSTASLTRTPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPRASP-- 220

Query: 191 VTGSSPAWRVSPVLSPAKK 247
            T   P  R SP  +P ++
Sbjct: 221 -TRRPP--RASPTRTPPRE 236


>AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45893 fis, clone OCBBF3023543. ).
          Length = 1223

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  TAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETVTGSSP---AWRV 220
           T ++G +    +V P L+   N H  Y RTL  +S     A+    +V    P   AW  
Sbjct: 425 TPSSGPLDEEGAVAPVLA---NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGP 481

Query: 221 SPVLSPA 241
           SP   PA
Sbjct: 482 SPPTHPA 488


>AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13725 fis, clone PLACE3000009, weakly similar to
           DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
           2.7.7.6). ).
          Length = 858

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 50  TAATGLISSNPSVTPRLSLASNAHQKYQRTLRRLSSGRSPASPYPETVTGSSP---AWRV 220
           T ++G +    +V P L+   N H  Y RTL  +S     A+    +V    P   AW  
Sbjct: 60  TPSSGPLDEEGAVAPVLA---NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGP 116

Query: 221 SPVLSPA 241
           SP   PA
Sbjct: 117 SPPTHPA 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,375,656
Number of Sequences: 237096
Number of extensions: 1456703
Number of successful extensions: 8545
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8544
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)