Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30668
(714 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 27 0.77
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 27 0.77
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 3.1
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 4.1
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 23 7.2
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.6 bits (56), Expect = 0.77
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 482 TALARQPRVSGSRSRPG 432
T LARQP V GSR R G
Sbjct: 405 TTLARQPSVGGSRRRGG 421
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 26.6 bits (56), Expect = 0.77
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 482 TALARQPRVSGSRSRPG 432
T LARQP V GSR R G
Sbjct: 406 TTLARQPSVGGSRRRGG 422
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Frame = +3
Query: 3 EISQAHASCICW-CYCSRRPSP 65
E C+C C C RRP+P
Sbjct: 558 EECSGRGQCVCGVCVCERRPNP 579
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 24.2 bits (50), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 489 IERIPTIELDEKNEKINSEPVPEVVFYIILR 581
I ++P + +EK EP P+++F I LR
Sbjct: 207 IMKVPAVR-NEKFYSCCEEPYPDIIFNITLR 236
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 221 DCRFLCFSLTSNLLRDLM--INSSSAGLRLETQYSRSRPERLNRL 93
DCR S+ N LRDL + +A +L+ Y+ +L+RL
Sbjct: 134 DCRLADLSVPRNRLRDLPTGVERLTALRKLDYSYNLLEEFKLDRL 178
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,361
Number of Sequences: 2352
Number of extensions: 11280
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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