Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30666
         (477 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated prot...    33   0.39 
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     33   0.39 
BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated prot...    33   0.39 
BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated prot...    33   0.39 
BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated prot...    33   0.39 
AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated prot...    33   0.39 
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    33   0.39 
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    33   0.39 
X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.    32   0.90 
BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain cont...    30   3.6  
BC043210-1|AAH43210.1|  334|Homo sapiens FLJ22374 protein protein.     29   8.3  

>BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 112 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 164


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 122 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 174


>BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 112 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 164


>BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 112 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 164


>BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 112 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 164


>AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated protein
           1.3 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 112 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 164


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 86  DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 138


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCL-SALYSTVLMVPSARADCTRPSQRHRHGSRAGTCCRRCE 178
           D RV  T L P C+ S    T   +  A A C RPS   +   R   CC  CE
Sbjct: 122 DCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCE 174


>X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.
          Length = 175

 Score = 32.3 bits (70), Expect = 0.90
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 333 DPRVSTTALNPLCLSALYS-TVLMVPSARADCTRPSQRHRHGSRAGTCCRRC 181
           D RV  T L P C+ + ++ T   +  A A C RPS   +   R   CC  C
Sbjct: 121 DCRVEGTCLPPCCVVSCHTPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 172


>BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain
            containing 40 protein.
          Length = 1031

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -1

Query: 255  ARADCTRPSQRH---RHGSRAGTCCRRCEDPLLCTQRRI*DERDSRR 124
            ARA  TR ++RH   +HG+RAGTC           Q R    RD+RR
Sbjct: 977  ARARTTRDARRHVHEQHGTRAGTCTNNTGR----AQARARTTRDARR 1019


>BC043210-1|AAH43210.1|  334|Homo sapiens FLJ22374 protein protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 192 NKYQHETRDGDVVKGVYSLHEPMVPSGLLSTAPINTADSTQLWRR 326
           +K +H+  DGDV+    S   P   S  + T P  T   T  W R
Sbjct: 137 SKARHDNLDGDVLGNFVSSKRPPHKSKPMQTVPGETPVLTSAWER 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,795,042
Number of Sequences: 237096
Number of extensions: 1117518
Number of successful extensions: 6621
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6621
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)