Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30666
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 29 1.7
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 29 1.7
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 28 4.0
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 28 4.0
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 28 4.0
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 27 5.3
AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical... 27 7.0
Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 27 9.2
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 27 9.2
U41274-1|AAA82458.1| 188|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL132860-10|CAB60525.1| 615|Caenorhabditis elegans Hypothetical... 27 9.2
AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 185 RRQQVPARDP*R*RCEGRVQSARADGTIRTVEYSADKHSGFN 310
RRQ+ +RDP R R + R + D TI SA KH N
Sbjct: 133 RRQEYYSRDPPRERRDSRSRRDDVDTTINRSSSSASKHHDEN 174
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 185 RRQQVPARDP*R*RCEGRVQSARADGTIRTVEYSADKHSGFN 310
RRQ+ +RDP R R + R + D TI SA KH N
Sbjct: 133 RRQEYYSRDPPRERRDSRSRRDDVDTTINRSSSSASKHHDEN 174
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 261 PSARADCTRPSQRHRHGSRAGTCCRRCEDPLLCTQRRI*DERDSRRGGRHVRDDVHDRGV 82
P A TRPS H R + C R D + S++ R+ G+
Sbjct: 667 PLAIQILTRPSLPHLDLQRMDSIGTTCSSKTRADSLRSVDSKGSKKSNRN--------GI 718
Query: 81 ALNELHGAIPHDHGVPRAVLK 19
A+ + AI H+H + R V K
Sbjct: 719 AVKLVKRAIKHEHSLKRKVSK 739
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 261 PSARADCTRPSQRHRHGSRAGTCCRRCEDPLLCTQRRI*DERDSRRGGRHVRDDVHDRGV 82
P A TRPS H R + C R D + S++ R+ G+
Sbjct: 532 PLAIQILTRPSLPHLDLQRMDSIGTTCSSKTRADSLRSVDSKGSKKSNRN--------GI 583
Query: 81 ALNELHGAIPHDHGVPRAVLK 19
A+ + AI H+H + R V K
Sbjct: 584 AVKLVKRAIKHEHSLKRKVSK 604
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 261 PSARADCTRPSQRHRHGSRAGTCCRRCEDPLLCTQRRI*DERDSRRGGRHVRDDVHDRGV 82
P A TRPS H R + C R D + S++ R+ G+
Sbjct: 532 PLAIQILTRPSLPHLDLQRMDSIGTTCSSKTRADSLRSVDSKGSKKSNRN--------GI 583
Query: 81 ALNELHGAIPHDHGVPRAVLK 19
A+ + AI H+H + R V K
Sbjct: 584 AVKLVKRAIKHEHSLKRKVSK 604
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -1
Query: 261 PSARADCTRPSQRHRHGSRAGTCCRRCEDPLLCTQRRI*DERDSRRGGRHVRDDVHDRGV 82
P A TRPS H R + C R D + S++ R+ G+
Sbjct: 667 PLAIQILTRPSLPHLDLQRMDSIGTTCSSKTRADSLRSVDSKGSKKSNRN--------GI 718
Query: 81 ALNELHGAIPHDHGVPRAVLK 19
A+ + AI H+H + R V K
Sbjct: 719 AVKLVKRAIKHEHSLKRKVSK 739
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 252 EPMVPSGLLSTAPINTADSTQLWRRE 329
EP PS L+T P+ TA S LW +
Sbjct: 589 EPSNPSTPLATTPVTTAASICLWNND 614
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 168 VEDPHTGDNKYQHETRDGDVVKGVYSLHEPMVPSGLLSTAPINTADSTQ 314
+ + G+N + E +GD+ G +PSG + AP N D ++
Sbjct: 159 INEEDIGNNDDEEEEMEGDLEYGDEETPLSFIPSGTVVGAPANQDDGSK 207
>AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical
protein Y52B11A.7 protein.
Length = 529
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 259 IGSCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAYLG 143
+GS L+T SP+ S +LSPV +S + S A G
Sbjct: 351 VGSPLLFTSIVASPATASQALILSPVLFTSLILSPAIYG 389
>Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical
protein F35E12.7d protein.
Length = 577
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 258 MVPSGLLSTAPINTADSTQLWR 323
+VPSG STAPI T+ ST+ R
Sbjct: 481 VVPSGSFSTAPIVTSVSTRATR 502
>Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical
protein F35E12.7c protein.
Length = 537
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 258 MVPSGLLSTAPINTADSTQLWR 323
+VPSG STAPI T+ ST+ R
Sbjct: 481 VVPSGSFSTAPIVTSVSTRATR 502
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 258 MVPSGLLSTAPINTADSTQLWR 323
+VPSG STAPI T+ ST+ R
Sbjct: 481 VVPSGSFSTAPIVTSVSTRATR 502
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 225 RHRHGSRAGTCCRRCEDPL 169
R H R CCR+CE PL
Sbjct: 160 RADHAKRYQKCCRKCEIPL 178
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 225 RHRHGSRAGTCCRRCEDPL 169
R H R CCR+CE PL
Sbjct: 160 RADHAKRYQKCCRKCEIPL 178
>U41274-1|AAA82458.1| 188|Caenorhabditis elegans Hypothetical
protein T04G9.5 protein.
Length = 188
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 183 TGDNKYQHETRDGDVVKGVYSLHEPMVPSG 272
T D+++ T D+VKG+ +H +P+G
Sbjct: 62 TIDDRHSFPTNSFDIVKGLLFVHFEQIPAG 91
>AL132860-10|CAB60525.1| 615|Caenorhabditis elegans Hypothetical
protein Y56A3A.12b protein.
Length = 615
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 195 KYQHETRDGDVVKGVYSLHEPMVPSGLLSTAPINTADSTQL 317
+Y + +G + G++++ + VP+G++ +P+N D QL
Sbjct: 485 EYPAQLSNGAFITGLFNMLD--VPAGVVPVSPVNQKDVDQL 523
>AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical
protein Y56A3A.12a protein.
Length = 647
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 195 KYQHETRDGDVVKGVYSLHEPMVPSGLLSTAPINTADSTQL 317
+Y + +G + G++++ + VP+G++ +P+N D QL
Sbjct: 517 EYPAQLSNGAFITGLFNMLD--VPAGVVPVSPVNQKDVDQL 555
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,369,122
Number of Sequences: 27780
Number of extensions: 173597
Number of successful extensions: 559
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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