Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30665
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100275-1|AAI00276.1| 151|Homo sapiens coiled-coil-helix-coile... 72 2e-12
BC071985-1|AAH71985.1| 151|Homo sapiens coiled-coil-helix-coile... 72 2e-12
BC066331-1|AAH66331.1| 151|Homo sapiens CHCHD2 protein protein. 72 2e-12
BC015639-1|AAH15639.1| 151|Homo sapiens coiled-coil-helix-coile... 72 2e-12
BC003079-1|AAH03079.1| 151|Homo sapiens coiled-coil-helix-coile... 72 2e-12
AY633613-1|AAV33306.1| 151|Homo sapiens aging-associated gene 1... 72 2e-12
AY605046-1|AAT35813.1| 151|Homo sapiens HCV NS2 trans-regulated... 72 2e-12
AC006970-1|AAQ96886.1| 151|Homo sapiens unknown protein. 72 2e-12
BC065232-1|AAH65232.1| 142|Homo sapiens chromosome 22 open read... 62 1e-09
AB050774-1|BAB83036.1| 142|Homo sapiens N27C7-4 protein. 62 1e-09
AL450243-1|CAI15794.1| 151|Homo sapiens coiled-coil-helix-coile... 58 2e-08
D26069-1|BAA05064.2| 781|Homo sapiens KIAA0041 protein. 30 6.7
BC060767-1|AAH60767.1| 778|Homo sapiens centaurin, beta 2 protein. 30 6.7
AJ238248-1|CAB41450.1| 778|Homo sapiens centaurin beta2 protein. 30 6.7
>BC100275-1|AAI00276.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>BC071985-1|AAH71985.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>BC066331-1|AAH66331.1| 151|Homo sapiens CHCHD2 protein protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>BC015639-1|AAH15639.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>BC003079-1|AAH03079.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>AY633613-1|AAV33306.1| 151|Homo sapiens aging-associated gene 10
protein protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>AY605046-1|AAT35813.1| 151|Homo sapiens HCV NS2 trans-regulated
protein protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>AC006970-1|AAQ96886.1| 151|Homo sapiens unknown protein.
Length = 151
Score = 71.7 bits (168), Expect = 2e-12
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E TY + QG QPAQ PC +EIKQFLECAQ Q D+ LC+GF
Sbjct: 84 FSGGSNAEPARPDI------TYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGF 137
Query: 429 NEVLRQCKVNN 461
NEVL+QC++ N
Sbjct: 138 NEVLKQCRLAN 148
>BC065232-1|AAH65232.1| 142|Homo sapiens chromosome 22 open reading
frame 16 protein.
Length = 142
Score = 62.5 bits (145), Expect = 1e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +3
Query: 339 QPAQ-GPCAWEIKQFLECAQQQHDLSLCDGFNEVLRQCK 452
QP Q GPCA+EI+QFL+C+ Q DLSLC+GF+E L+QCK
Sbjct: 95 QPLQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCK 133
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 208 SVGSAVGHVAGSALTG 255
+VGSAVGHV GSALTG
Sbjct: 56 AVGSAVGHVMGSALTG 71
>AB050774-1|BAB83036.1| 142|Homo sapiens N27C7-4 protein.
Length = 142
Score = 62.5 bits (145), Expect = 1e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +3
Query: 339 QPAQ-GPCAWEIKQFLECAQQQHDLSLCDGFNEVLRQCK 452
QP Q GPCA+EI+QFL+C+ Q DLSLC+GF+E L+QCK
Sbjct: 95 QPLQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCK 133
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 208 SVGSAVGHVAGSALTG 255
+VGSAVGHV GSALTG
Sbjct: 56 AVGSAVGHVMGSALTG 71
>AL450243-1|CAI15794.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 9
protein.
Length = 151
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 FSGGGSSEXXXXXXXXXXXXTYNQYQG-QPAQG--PCAWEIKQFLECAQQQHDLSLCDGF 428
FSGG ++E Y + QG QPAQ PC + IKQFLECAQ Q D+ LC+ F
Sbjct: 84 FSGGSNAEPARPDI------AYQEPQGTQPAQQQQPCFYGIKQFLECAQNQGDIKLCEDF 137
Query: 429 NEVLRQCKV 455
++VL+QC++
Sbjct: 138 SKVLKQCRL 146
>D26069-1|BAA05064.2| 781|Homo sapiens KIAA0041 protein.
Length = 781
Score = 30.3 bits (65), Expect = 6.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 43 STRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSVG 216
S K+ K ++ + C P CG DP + S + L I G H RS+G
Sbjct: 394 SKEKLLKGESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIH---RSLG 448
>BC060767-1|AAH60767.1| 778|Homo sapiens centaurin, beta 2 protein.
Length = 778
Score = 30.3 bits (65), Expect = 6.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 43 STRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSVG 216
S K+ K ++ + C P CG DP + S + L I G H RS+G
Sbjct: 391 SKEKLLKGESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIH---RSLG 445
>AJ238248-1|CAB41450.1| 778|Homo sapiens centaurin beta2 protein.
Length = 778
Score = 30.3 bits (65), Expect = 6.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 43 STRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSVG 216
S K+ K ++ + C P CG DP + S + L I G H RS+G
Sbjct: 391 SKEKLLKGESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIH---RSLG 445
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,322,836
Number of Sequences: 237096
Number of extensions: 1781726
Number of successful extensions: 7407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7386
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -