Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30665
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    60   2e-09
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p...    31   1.0  
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei...    31   1.0  
Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U97550-4|AAK18978.2|  773|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    27   9.5  

>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = +3

Query: 255 MFSGGGSSEXXXXXXXXXXXXTYNQYQGQPAQGPCAWEIKQFLECAQQQHDLSLCDGFNE 434
           MF+GGGSS                Q  G     PC +E +QF++CAQ Q D+SLC+GFN+
Sbjct: 87  MFTGGGSSHAEQAPAAAAAPAGAPQASGYSQ--PCEFEWRQFVDCAQNQSDVSLCNGFND 144

Query: 435 VLRQCK 452
           + +QCK
Sbjct: 145 IFKQCK 150


>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
           protein C36B1.1d protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 253 GCLVVVEAANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMAS 429
           G  V+V A  +PS   Q  +L P T+ R    +  A G +  SW+  N  S++ +S+ ++
Sbjct: 114 GTKVMVAAKTRPSEGSQTEKLWPPTSVRARIDEKSAAGSAFVSWDDPNPESSSENSIDST 173

Query: 430 MKFYV 444
            K YV
Sbjct: 174 QKQYV 178


>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
           protein C36B1.1a protein.
          Length = 1138

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 253 GCLVVVEAANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMAS 429
           G  V+V A  +PS   Q  +L P T+ R    +  A G +  SW+  N  S++ +S+ ++
Sbjct: 114 GTKVMVAAKTRPSEGSQTEKLWPPTSVRARIDEKSAAGSAFVSWDDPNPESSSENSIDST 173

Query: 430 MKFYV 444
            K YV
Sbjct: 174 QKQYV 178


>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
           protein C36B1.1d protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 253 GCLVVVEAANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMAS 429
           G  V+V A  +PS   Q  +L P T+ R    +  A G +  SW+  N  S++ +S+ ++
Sbjct: 114 GTKVMVAAKTRPSEGSQTEKLWPPTSVRARIDEKSAAGSAFVSWDDPNPESSSENSIDST 173

Query: 430 MKFYV 444
            K YV
Sbjct: 174 QKQYV 178


>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
           protein C36B1.1a protein.
          Length = 1138

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 253 GCLVVVEAANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMAS 429
           G  V+V A  +PS   Q  +L P T+ R    +  A G +  SW+  N  S++ +S+ ++
Sbjct: 114 GTKVMVAAKTRPSEGSQTEKLWPPTSVRARIDEKSAAGSAFVSWDDPNPESSSENSIDST 173

Query: 430 MKFYV 444
            K YV
Sbjct: 174 QKQYV 178


>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
           protein.
          Length = 1117

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 253 GCLVVVEAANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMAS 429
           G  V+V A  +PS   Q  +L P T+ R    +  A G +  SW+  N  S++ +S+ ++
Sbjct: 114 GTKVMVAAKTRPSEGSQTEKLWPPTSVRARIDEKSAAGSAFVSWDDPNPESSSENSIDST 173

Query: 430 MKFYV 444
            K YV
Sbjct: 174 QKQYV 178


>Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical
           protein F16H6.3 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 67  STSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 174
           +T+ ++ SCS +   TS+C S +P  DSSS+ AA A
Sbjct: 198 ATTTTQASCSSSGGSTSTCTSYNP--DSSSSCAAWA 231


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +1

Query: 40   ASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSVGS 219
            +ST+  S  S  +SK S SP    TSS  +   G   SST  +  I     H       S
Sbjct: 1394 SSTQSFSSTSEGSSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASS 1453

Query: 220  AVGHVAGSALTGCLVVVEAAN 282
                 + ++ TG  V + +++
Sbjct: 1454 GSTSPSTNSQTGSTVTMGSSS 1474


>U97550-4|AAK18978.2|  773|Caenorhabditis elegans Hypothetical
           protein T20F7.1 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 331 TRDSRLKDHARGRSSNSWNVLN-NSTTCHSVMASMKFYVNA-KSITTSKL 474
           T+ + +KD  +   S S   L+ +S+  HS++A+ KFY    K +   KL
Sbjct: 144 TKFTEIKDRPKTHESKSGRTLDPDSSALHSLLAANKFYPTVDKPVPDQKL 193


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 321 YNQYQGQPAQGPCAWEIKQ---FLECAQQQHDLSLC 419
           Y Q Q  PAQ PCA + +Q      CA  Q D   C
Sbjct: 51  YTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPCAC 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,886,352
Number of Sequences: 27780
Number of extensions: 273463
Number of successful extensions: 678
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)