Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30663
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    29   0.028
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    29   0.037
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.46 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 29.5 bits (63), Expect = 0.028
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = +1

Query: 484 KPTAAAIASVLTKRVLEERNCTYL*PRAGGTFRRVHPLTIE 606
           +PTAAAIA  L K+  +ERN   +    GGTF  V  LTIE
Sbjct: 3   EPTAAAIAYGLDKKAEKERN-VLIFDLGGGTF-DVSLLTIE 41


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 0.037
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = +1

Query: 484 KPTAAAIASVLTKRVLEERNCTYL*PRAGGTFRRVHPLTIE 606
           +PTAAAIA  L K+   ERN   +    GGTF  V  LTIE
Sbjct: 3   EPTAAAIAYGLDKKAERERN-VLIFDLGGGTF-DVSLLTIE 41


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +1

Query: 484 KPTAAAIASVLTKRVLEERNCTYL*PRAGGTFRRVHPLTIE 606
           +PTAAAIA  L K+  E+    Y     GGTF  V  LTI+
Sbjct: 3   EPTAAAIAYGLDKKGAEQNILVY--DLGGGTF-DVSILTID 40


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 19  LPAREGGDHRQRPGQQDH 72
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +1

Query: 319 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 444
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 257 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 373
           KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 637 RPGDNPNFWE 666
           RPG N N WE
Sbjct: 97  RPGSNDNSWE 106


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -2

Query: 173 FGIEYCDCWGSSPPGSW 123
           F   +C   GS PP  W
Sbjct: 310 FSTHFCRTLGSLPPFKW 326


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 664 PKSWGCPPAGWISPSKITIPRW 599
           P  +G PP+G   P  +  PR+
Sbjct: 62  PHHYGGPPSGGQPPQGMPYPRF 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,556
Number of Sequences: 336
Number of extensions: 4154
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)