Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30663
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 200 1e-52
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 198 5e-52
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 175 4e-45
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 165 4e-42
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 126 3e-30
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 1e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 62 6e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 35 0.010
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 30 0.38
SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein S15a... 29 0.50
SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein S... 29 0.50
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 29 0.50
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 26 4.6
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 26 4.6
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 26 6.1
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 6.1
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 25 8.1
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 8.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 200 bits (489), Expect = 1e-52
Identities = 115/198 (58%), Positives = 130/198 (65%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMNPNNHNIRCQTSH 181
YSCVG F + +VEIIANDQGNRTTPSYVAFTDT RLIGDAAKNQVAMNP+N +
Sbjct: 13 YSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLI 72
Query: 182 RT*VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 361
S + F+ KP ++V YKGE KTF PEE+SSMVL KM+ETAEAY
Sbjct: 73 GRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAY 132
Query: 362 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIHQ*NXXXXXXXXS*QKGYWRNE 541
LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRI +
Sbjct: 133 LGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN-EPTAAAIAYGLDRSNQGES 191
Query: 542 IVLIFDLGRAVPFDVSIL 595
VLIFDLG FDVS+L
Sbjct: 192 NVLIFDLGGGT-FDVSLL 208
Score = 64.9 bits (151), Expect = 1e-11
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 156 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGANLRSR*HIRVKTKPFSPRK 314
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S + + +TK F+P +
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEE 116
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 198 bits (484), Expect = 5e-52
Identities = 113/198 (57%), Positives = 131/198 (66%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMNPNNHNIRCQTSH 181
YSCVG F + +VEIIANDQGNRTTPSYVAFTDT RLIGDAAKNQVAMNP+N +
Sbjct: 13 YSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLI 72
Query: 182 RT*VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 361
S + F+ + KP I+V +KGE KTF PEE+SSMVL KM+E+AEA+
Sbjct: 73 GRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAF 132
Query: 362 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIHQ*NXXXXXXXXS*QKGYWRNE 541
LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRI +
Sbjct: 133 LGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN-EPTAAAIAYGLDRSNQHET 191
Query: 542 IVLIFDLGRAVPFDVSIL 595
VLIFDLG FDVS+L
Sbjct: 192 NVLIFDLGGGT-FDVSLL 208
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 175 bits (427), Expect = 4e-45
Identities = 99/198 (50%), Positives = 126/198 (63%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMNPNNHNIRCQTSH 181
YSCV V ++G+VEIIANDQGNR TPSYVAFT+ RL+G+AAKNQ NP N +
Sbjct: 46 YSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLI 105
Query: 182 RT*VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 361
A ++ F ++P ++V G+ K F PEE+S+M+L+KMK+TAEAY
Sbjct: 106 GRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAY 165
Query: 362 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIHQ*NXXXXXXXXS*QKGYWRNE 541
LGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI K
Sbjct: 166 LGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVN-EPTAAAIAYGLDKTDTEKH 224
Query: 542 IVLIFDLGRAVPFDVSIL 595
IV ++DLG FDVS+L
Sbjct: 225 IV-VYDLGGGT-FDVSLL 240
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 165 bits (402), Expect = 4e-42
Identities = 101/198 (51%), Positives = 120/198 (60%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMNPNNHNIRCQTSH 181
YSCV V++ VEII NDQG RTTPS+VAFT+T RL+GDAAKNQ AMNP N +
Sbjct: 17 YSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLI 76
Query: 182 RT*VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 361
+ F+ P I+V Y GE K F +E+S+MVLTKMKE +EA
Sbjct: 77 GRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAK 136
Query: 362 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIHQ*NXXXXXXXXS*QKGYWRNE 541
L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRI K + +
Sbjct: 137 LNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSD-KPK 195
Query: 542 IVLIFDLGRAVPFDVSIL 595
VLIFDLG FDVS+L
Sbjct: 196 NVLIFDLGGGT-FDVSLL 212
Score = 54.0 bits (124), Expect = 2e-08
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 156 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 251
T+FDAKRLIGR++ED Q D+KHWPF+V+ +
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDN 99
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 126 bits (304), Expect = 3e-30
Identities = 80/198 (40%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +2
Query: 5 SCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DT*RLIGDAAKNQVAMNPNNHNIRCQTSH 181
SC+ + + ++IAN +G RTTPS VAFT D RL+G +AK Q +NP N +
Sbjct: 62 SCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLI 121
Query: 182 RT*VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAY 361
+ + + ++ + S + +G KT+ P ++ +L+KM+ETA Y
Sbjct: 122 GRRFKEPEVQRDIKEVPYKIVE-HSNGDAWLEARG--KTYSPSQIGGFILSKMRETASTY 178
Query: 362 LGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIHQ*NXXXXXXXXS*QKGYWRNE 541
LGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR+ +K +
Sbjct: 179 LGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK---NDA 235
Query: 542 IVLIFDLGRAVPFDVSIL 595
IV +FDLG FD+SIL
Sbjct: 236 IVAVFDLGGGT-FDISIL 252
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 156 TIFDAKRLIGRKFEDATVQADMKHWPFEVV 245
T F KRLIGR+F++ VQ D+K P+++V
Sbjct: 113 TFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.3 bits (167), Expect = 1e-13
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +2
Query: 11 VGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMN-PNNHNIRCQTSHRT 187
+ V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A N N + + RT
Sbjct: 19 IAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRT 78
Query: 188 *VRRCYCASRHEALAFRGCQ*WSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLG 367
++ + + KV Y E+ F ++ + TK+K AEA L
Sbjct: 79 YDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELI 138
Query: 368 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 475
+V + VI++PA+F D QR+A +A I+GLN LR+
Sbjct: 139 GSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRL 174
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 62.5 bits (145), Expect = 6e-11
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Frame = +2
Query: 5 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT*RLIGDAAKNQVAMNPNNHNIRCQTSHR 184
S + + GK +++AN++GNR PS +++ G A+ Q+ N +N T+ R
Sbjct: 36 SSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS----VTNFR 91
Query: 185 T*VRRCYCASRHEALAFRGCQ*WSKP---------KIKVAYKGE----DKTFFPEEVSSM 325
H+ L C + P KI V E +K E S
Sbjct: 92 D-----LLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEASVR 146
Query: 326 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 475
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++
Sbjct: 147 HLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQL 196
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.1 bits (77), Expect = 0.010
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 287 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 466
+++ + EE+ +M + AE + + + V+TVP +FN+ QR +A I +V
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHV 190
Query: 467 LRI 475
L +
Sbjct: 191 LAL 193
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 29.9 bits (64), Expect = 0.38
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 583 VERYRPPEVKDKYNFVPPVPFLSRPKQSQQQSVSLMNSENVQAR 452
+ +++ PE K F P S PKQS S SL+NS N +
Sbjct: 48 ISKFQAPEDK----FFPSFSLKSMPKQSSHMSASLLNSLNTSMK 87
>SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 563 RGQR*VQFRSSSTLFVKTEAIAAAVGFIDEFGERSSQR 450
RG+R V R SS + VK + G+IDEF E R
Sbjct: 20 RGRRQVLIRPSSKVIVKFLTVMQKHGYIDEFTEIDDHR 57
>SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 563 RGQR*VQFRSSSTLFVKTEAIAAAVGFIDEFGERSSQR 450
RG+R V R SS + VK + G+IDEF E R
Sbjct: 20 RGRRQVLIRPSSKVIVKFLTVMQKHGYIDEFTEIDDHR 57
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 29.5 bits (63), Expect = 0.50
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 565 AGGTFRRVHPLTIEGW*SSRVKSTRPGDNP 654
AGG+ ++PLT+ G+ +R ST+ DNP
Sbjct: 194 AGGSESCINPLTVAGFSKARSLSTKFNDNP 223
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 613 TIPRWLKDGHVERYRPPEVKDKYNFVPPVPFL 518
T P ++ GH+ PP +DK F VPFL
Sbjct: 776 TGPLRIRSGHLPEVHPPAAEDKGKF-EVVPFL 806
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 238 SKGQCFMSACTVASSNLRPMRRLASNIVIVGVHRHLV 128
S G CF+ +V + +P R +N +G+ +HL+
Sbjct: 2 SPGLCFLKEISVIQATPKPTTRSFANCCKMGILQHLM 38
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 500 AAAVGFIDEFGERSSQRWYLHLLWLVFE 417
+AAV EF ER ++ YLH WLV E
Sbjct: 398 SAAVSCFLEFMERKNRSRYLH-FWLVVE 424
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 636 GGFHPRRLPSLDG*RMDTSKGTARPRSKISTISFLQYP 523
G HP L L+ +D S ARPR +S + L P
Sbjct: 283 GCTHPPSLNQLNKFHLDASPRQARPRRSVSLATGLNSP 320
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -3
Query: 622 SKITIPRWLKDGHVERYRPPEVKDKYNFVPPVPFLSRPKQSQQQSVSLMNSENVQARDGT 443
SKI + L++G ++ + P ++KDK + F+ + + + S SL N +NV
Sbjct: 581 SKIIHIQKLENGPLKTFGPTQIKDKARLI-KARFMKQNRLQELYSKSL-NWKNVTVGQAY 638
Query: 442 C 440
C
Sbjct: 639 C 639
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 314 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 436
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,227,364
Number of Sequences: 5004
Number of extensions: 69522
Number of successful extensions: 209
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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