Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30662
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.8  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 441 RRMRGWPSRLNTTLL-LAPMTFAVVFRHRQIRISCWYSNV 325
           +R R  PSR+NT L+ LA     V F    + I  W S V
Sbjct: 79  KRRRKTPSRINTMLMHLAIADLLVTFLMMPLEIG-WASTV 117


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 441 RRMRGWPSRLNTTLL-LAPMTFAVVFRHRQIRISCWYSNV 325
           +R R  PSR+NT L+ LA     V F    + I  W S V
Sbjct: 79  KRRRKTPSRINTMLMHLAIADLLVTFLMMPLEIG-WASTV 117


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 133 KRRVFGVTEEQGQTHHQNKTRR 198
           + +++GV EE  +T H N+  R
Sbjct: 339 REKIYGVLEEYTRTTHPNEPGR 360


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 595 LMPVYC*ANVFQPIGFYRIRTFSLE 669
           L P++    +F  + +Y    FSLE
Sbjct: 11  LRPIFAVCRLFALVPYYNFEKFSLE 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,053
Number of Sequences: 336
Number of extensions: 3094
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)