Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30662
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029505-1|AAH29505.1|  509|Homo sapiens zinc finger protein 683...    31   5.5  
AL451139-19|CAI15853.1|  509|Homo sapiens novel protein protein.       31   5.5  

>BC029505-1|AAH29505.1|  509|Homo sapiens zinc finger protein 683
           protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 289 PYRCRVPLTSSRSHYLDHVRFQNNIICHYRFVGS 188
           P++C +P    R+H+     ++   +CH RF  S
Sbjct: 362 PHKCSIPWVPGRNHWKSFQAWREREVCHKRFSSS 395


>AL451139-19|CAI15853.1|  509|Homo sapiens novel protein protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 289 PYRCRVPLTSSRSHYLDHVRFQNNIICHYRFVGS 188
           P++C +P    R+H+     ++   +CH RF  S
Sbjct: 362 PHKCSIPWVPGRNHWKSFQAWREREVCHKRFSSS 395


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,583,796
Number of Sequences: 237096
Number of extensions: 1902852
Number of successful extensions: 2547
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2547
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)